G145342


Basic Information

Item Value
gene id G145342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 43135470 ~ 43185344 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU166830
acggctttaaacttattcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatctcctgacccctcctgtctcagcctccagtatttatgctgcagtagtttatgtgtcggggggctagggtcagtttgttatatctggagtacttctcctgtcctatttggtgtcctgtgtgaatctaagtgtgcgttctct

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166830 True 239 lncRNA 0.47 2 43135470 43185344

Neighbor

gene id symbol gene type direction distance location
LOC110490122 LOC106605034 coding upstream 37616 43091038 ~ 43097854 (+)
LOC100301866 LOC106584110 coding upstream 92991 43025400 ~ 43042479 (+)
LOC110490064 LOC106605040 coding upstream 157466 42975400 ~ 42978004 (+)
LOC110490056 LOC106605039 coding upstream 160316 42971015 ~ 42975154 (+)
LOC110501569 mms22l coding upstream 224727 42878213 ~ 42910743 (+)
LOC110490166 LOC106605016 coding downstream 85322 43270666 ~ 43275284 (+)
LOC110490176 NA coding downstream 165783 43351127 ~ 43353661 (+)
LOC110501584 NA coding downstream 366238 43551582 ~ 43558937 (+)
LOC110490199 NA coding downstream 384946 43570290 ~ 43596359 (+)
LOC110501593 pigv coding downstream 411970 43597314 ~ 43599427 (+)
G145341 NA non-coding upstream 239 43134988 ~ 43135231 (+)
G145334 NA non-coding upstream 7739 43127223 ~ 43127731 (+)
G145332 NA non-coding upstream 10205 43124991 ~ 43125265 (+)
G145328 NA non-coding upstream 16614 43118619 ~ 43118856 (+)
G145324 NA non-coding upstream 24196 43111009 ~ 43111274 (+)
G145402 NA non-coding downstream 40453 43225797 ~ 43226015 (+)
G145403 NA non-coding downstream 40908 43226252 ~ 43226751 (+)
G145411 NA non-coding downstream 58157 43243501 ~ 43243768 (+)
G145415 NA non-coding downstream 63693 43249037 ~ 43249286 (+)
G145420 NA non-coding downstream 124824 43310168 ~ 43359884 (+)
G144661 NA other upstream 569440 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 1166153 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 1593879 41539240 ~ 41541654 (+)
G139179 NA other upstream 5083726 38051359 ~ 38051744 (+)
G139101 NA other upstream 5191458 37943742 ~ 37944012 (+)
G146054 LOC100136012 other downstream 545528 43730872 ~ 43731218 (+)
G146091 NA other downstream 583363 43768707 ~ 43769162 (+)
G146114 NA other downstream 614060 43799404 ~ 43799853 (+)
G146165 NA other downstream 701252 43886596 ~ 43889609 (+)
G146226 NA other downstream 811436 43996780 ~ 43997065 (+)

Expression


Co-expression Network