G145493


Basic Information

Item Value
gene id G145493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 43402459 ~ 43402945 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU166996
ccctgcgtcttggtcagaacagctcccctgggcagaatacgcccacaactcgcttccttcgtctgcgacagggctatctccttttcagagtagcctcgggtaccagcctccgctgttctcatctcagttcgccgagtccagcgtcccctccgctcaggcttttgtccaacgttgcgagcgcacctggaagagggtcaggtctgcactttgccgttatagggcgcagactgtgagagctgctaataagcgtagaactaagagtcctagatactgtcgcggtcagagagtttggctctccactcagaaccttccccttaagaccgcttctcgcaagttgaccccgcggttcattggtccgttccgtatttctcaaatcattaaccctgtcgcagtgcgacttcttctgccgcgatatcttcgtcgcgtccacccggtcttccatgtctcctgtgtcaagcccgttcttcgcgcccccgctcgtcttccc

Function

NR:

description
PREDICTED: uncharacterized protein LOC109108415

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166996 True 487 lncRNA 0.57 1 43402459 43402945

Neighbor

gene id symbol gene type direction distance location
LOC110490176 NA coding upstream 48798 43351127 ~ 43353661 (+)
LOC110490166 LOC106605016 coding upstream 127175 43270666 ~ 43275284 (+)
LOC110490122 LOC106605034 coding upstream 304605 43091038 ~ 43097854 (+)
LOC100301866 LOC106584110 coding upstream 359980 43025400 ~ 43042479 (+)
LOC110490064 LOC106605040 coding upstream 424455 42975400 ~ 42978004 (+)
LOC110501584 NA coding downstream 148637 43551582 ~ 43558937 (+)
LOC110490199 NA coding downstream 167345 43570290 ~ 43596359 (+)
LOC110501593 pigv coding downstream 194369 43597314 ~ 43599427 (+)
LOC110490231 LOC106605011 coding downstream 227520 43630465 ~ 43651752 (+)
LOC110490316 LOC106584327 coding downstream 544143 43947088 ~ 43950347 (+)
G145420 NA non-coding upstream 42575 43310168 ~ 43359884 (+)
G145415 NA non-coding upstream 153173 43249037 ~ 43249286 (+)
G145411 NA non-coding upstream 158691 43243501 ~ 43243768 (+)
G145403 NA non-coding upstream 175708 43226252 ~ 43226751 (+)
G145402 NA non-coding upstream 176444 43225797 ~ 43226015 (+)
G145508 NA non-coding downstream 22492 43425437 ~ 43425641 (+)
G145513 NA non-coding downstream 27766 43430711 ~ 43430935 (+)
G146039 NA non-coding downstream 303824 43706769 ~ 43715909 (+)
G146042 LOC106605010 non-coding downstream 316411 43719356 ~ 43719858 (+)
G146050 NA non-coding downstream 319918 43722863 ~ 43723100 (+)
G144661 NA other upstream 836429 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 1433142 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 1860868 41539240 ~ 41541654 (+)
G139179 NA other upstream 5350715 38051359 ~ 38051744 (+)
G139101 NA other upstream 5458447 37943742 ~ 37944012 (+)
G146054 LOC100136012 other downstream 327927 43730872 ~ 43731218 (+)
G146091 NA other downstream 365762 43768707 ~ 43769162 (+)
G146114 NA other downstream 396459 43799404 ~ 43799853 (+)
G146165 NA other downstream 483651 43886596 ~ 43889609 (+)
G146226 NA other downstream 593835 43996780 ~ 43997065 (+)

Expression


Co-expression Network