G146039


Basic Information

Item Value
gene id G146039
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 43706769 ~ 43715909 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU167607
gttttgcacatcgagagactgaaattctttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgactcattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacagatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattgagctgaaagtttagagggatggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcg

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167607 True 537 lncRNA 0.43 3 43706769 43715909

Neighbor

gene id symbol gene type direction distance location
LOC110490231 LOC106605011 coding upstream 55017 43630465 ~ 43651752 (+)
LOC110501593 pigv coding upstream 107342 43597314 ~ 43599427 (+)
LOC110490199 NA coding upstream 110410 43570290 ~ 43596359 (+)
LOC110501584 NA coding upstream 147832 43551582 ~ 43558937 (+)
LOC110490176 NA coding upstream 353108 43351127 ~ 43353661 (+)
LOC110490316 LOC106584327 coding downstream 231179 43947088 ~ 43950347 (+)
LOC110490326 LOC106605007 coding downstream 239140 43955049 ~ 43960992 (+)
LOC110490388 LOC106604983 coding downstream 749065 44464974 ~ 44472924 (+)
LOC110490437 LOC106584212 coding downstream 835254 44551163 ~ 44553979 (+)
LOC110490546 LOC106560730 coding downstream 1487400 45203309 ~ 45255843 (+)
G145513 NA non-coding upstream 275834 43430711 ~ 43430935 (+)
G145508 NA non-coding upstream 281128 43425437 ~ 43425641 (+)
G145493 NA non-coding upstream 303824 43402459 ~ 43402945 (+)
G145420 NA non-coding upstream 346885 43310168 ~ 43359884 (+)
G145415 NA non-coding upstream 457483 43249037 ~ 43249286 (+)
G146042 LOC106605010 non-coding downstream 3447 43719356 ~ 43719858 (+)
G146050 NA non-coding downstream 6954 43722863 ~ 43723100 (+)
G146043 NA non-coding downstream 7929 43723838 ~ 43724222 (+)
G146053 NA non-coding downstream 13612 43729521 ~ 43729792 (+)
G146055 NA non-coding downstream 15656 43731565 ~ 43731774 (+)
G144661 NA other upstream 1140739 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 1737452 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 2165178 41539240 ~ 41541654 (+)
G139179 NA other upstream 5655025 38051359 ~ 38051744 (+)
G139101 NA other upstream 5762757 37943742 ~ 37944012 (+)
G146054 LOC100136012 other downstream 14963 43730872 ~ 43731218 (+)
G146091 NA other downstream 52798 43768707 ~ 43769162 (+)
G146114 NA other downstream 83495 43799404 ~ 43799853 (+)
G146165 NA other downstream 170687 43886596 ~ 43889609 (+)
G146226 NA other downstream 280871 43996780 ~ 43997065 (+)

Expression


Co-expression Network