G146054 (LOC100136012)


Basic Information

Item Value
gene id G146054
gene name LOC100136012
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 43730872 ~ 43731218 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU167624
ggggctccatgcaagatctcacctcgtggcgcatcaatgatcatgaggaaggtgagggatcagcccagaactacacgacaggacctggtcaatgacctgaagagagctgggaccacagtctcaaagaaaaccattagtaacacactacgccgtcatggattaaaatcctgcagcgcacgcaaggtccccctgctcaagccagcgcatgtccaggcccgtctgaagtttgccaatgaccatctggatgatccagaggaggaatgggagaaggtcatgtggtcatgagacaaaaattgagctttttggtctaaactccactcgccgtgtttggaggaagaagaaggatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167624 True 347 TUCP 0.52 1 43730872 43731218

Neighbor

gene id symbol gene type direction distance location
LOC110490231 LOC106605011 coding upstream 79120 43630465 ~ 43651752 (+)
LOC110501593 pigv coding upstream 131445 43597314 ~ 43599427 (+)
LOC110490199 NA coding upstream 134513 43570290 ~ 43596359 (+)
LOC110501584 NA coding upstream 171935 43551582 ~ 43558937 (+)
LOC110490176 NA coding upstream 377211 43351127 ~ 43353661 (+)
LOC110490316 LOC106584327 coding downstream 215870 43947088 ~ 43950347 (+)
LOC110490326 LOC106605007 coding downstream 223831 43955049 ~ 43960992 (+)
LOC110490388 LOC106604983 coding downstream 733756 44464974 ~ 44472924 (+)
LOC110490437 LOC106584212 coding downstream 819945 44551163 ~ 44553979 (+)
LOC110490546 LOC106560730 coding downstream 1472091 45203309 ~ 45255843 (+)
G146053 NA non-coding upstream 1080 43729521 ~ 43729792 (+)
G146043 NA non-coding upstream 6650 43723838 ~ 43724222 (+)
G146050 NA non-coding upstream 7772 43722863 ~ 43723100 (+)
G146042 LOC106605010 non-coding upstream 11014 43719356 ~ 43719858 (+)
G146039 NA non-coding upstream 14963 43706769 ~ 43715909 (+)
G146055 NA non-coding downstream 347 43731565 ~ 43731774 (+)
G146060 NA non-coding downstream 4553 43735771 ~ 43736190 (+)
G146061 NA non-coding downstream 5458 43736676 ~ 43736890 (+)
G146062 NA non-coding downstream 5965 43737183 ~ 43737485 (+)
G146063 NA non-coding downstream 6468 43737686 ~ 43747147 (+)
G144661 NA other upstream 1164842 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 1761555 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 2189281 41539240 ~ 41541654 (+)
G139179 NA other upstream 5679128 38051359 ~ 38051744 (+)
G139101 NA other upstream 5786860 37943742 ~ 37944012 (+)
G146091 NA other downstream 37489 43768707 ~ 43769162 (+)
G146114 NA other downstream 68186 43799404 ~ 43799853 (+)
G146165 NA other downstream 155378 43886596 ~ 43889609 (+)
G146226 NA other downstream 265562 43996780 ~ 43997065 (+)
G146841 NA other downstream 697935 44429153 ~ 44429393 (+)

Expression


Co-expression Network