G146040


Basic Information

Item Value
gene id G146040
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 43766882 ~ 43767280 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU167610
TTGCttccaaagatgaaccagacttgtggaggtctacaatttttttctgaggtcttggctgatttcttttgattttcccatgatgtcaagcaaagaggcactgaactttaaggtaggccttgaaatccattcacaggtacacctccaattgactccaattatgtcaattagcctatcagaagcttctaaggccatgacataattttctggaattttccaagctgtttagaggcacagtcaacttagtgtatgtaaacttctgacccactggaattgtgatacagtgaattataagtgaaattatctgtctgtaaacaattgttggaaaaattacttgtgtcatgcacaaagtagatgtcctaactgacttgtcaaaactatagtttgttaacaagaaat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167610 True 399 lncRNA 0.37 1 43766882 43767280

Neighbor

gene id symbol gene type direction distance location
LOC110490231 LOC106605011 coding upstream 115130 43630465 ~ 43651752 (+)
LOC110501593 pigv coding upstream 167455 43597314 ~ 43599427 (+)
LOC110490199 NA coding upstream 170523 43570290 ~ 43596359 (+)
LOC110501584 NA coding upstream 207945 43551582 ~ 43558937 (+)
LOC110490176 NA coding upstream 413221 43351127 ~ 43353661 (+)
LOC110490316 LOC106584327 coding downstream 179808 43947088 ~ 43950347 (+)
LOC110490326 LOC106605007 coding downstream 187769 43955049 ~ 43960992 (+)
LOC110490388 LOC106604983 coding downstream 697694 44464974 ~ 44472924 (+)
LOC110490437 LOC106584212 coding downstream 783883 44551163 ~ 44553979 (+)
LOC110490546 LOC106560730 coding downstream 1436029 45203309 ~ 45255843 (+)
G146083 NA non-coding upstream 6473 43760101 ~ 43760409 (+)
G146078 NA non-coding upstream 11806 43754854 ~ 43755076 (+)
G146074 NA non-coding upstream 16424 43750173 ~ 43750458 (+)
G146063 NA non-coding upstream 19735 43737686 ~ 43747147 (+)
G146062 NA non-coding upstream 29397 43737183 ~ 43737485 (+)
G146092 NA non-coding downstream 2176 43769456 ~ 43769718 (+)
G146093 NA non-coding downstream 2994 43770274 ~ 43770761 (+)
G146095 NA non-coding downstream 4432 43771712 ~ 43771946 (+)
G146098 NA non-coding downstream 7135 43774415 ~ 43774851 (+)
G146099 NA non-coding downstream 7741 43775021 ~ 43775867 (+)
G146054 LOC100136012 other upstream 35664 43730872 ~ 43731218 (+)
G144661 NA other upstream 1200852 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 1797565 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 2225291 41539240 ~ 41541654 (+)
G139179 NA other upstream 5715138 38051359 ~ 38051744 (+)
G146091 NA other downstream 1427 43768707 ~ 43769162 (+)
G146114 NA other downstream 32124 43799404 ~ 43799853 (+)
G146165 NA other downstream 119316 43886596 ~ 43889609 (+)
G146226 NA other downstream 229500 43996780 ~ 43997065 (+)
G146841 NA other downstream 661873 44429153 ~ 44429393 (+)

Expression


Co-expression Network