G146093



Basic Information


Item Value
gene id G146093
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 43770274 ~ 43770761 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU167667
CATATATTGTATGTACGCTGGCATGTAACAGTATACAAGCTGTTACAAAAACATCACCATTTTCTTTTACTGCAGGCTCCCTTATCCAAGCTTTGAAACCAGATTATATTGGAGGATCTAAAATGATTACCAATAGTTTGTCACTGTTTTCTATCTCATCATTGCAGTCATGAAACATTCATCATTTtcccattgtcacgccctggtcttagtattttgtgttttctttattattttggtcaggccagggtgtgacatgggttaattatgtggtgtgttgtgtcttggggttttgtaggtgttgggattgtggtatagtggggttgtctagaaaagtctatggttgcctgaagtggttcttaatcagaggcaggtgtttattgttgtctctgattgggaaccatatttaggcagccatattctttgagtgtttcgtgggtgattgttcctgtctctgtttgcaccagataggctgtttaggttttttc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU167667 True 488 lncRNA 0.39 1 43770274 43770761
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110490231 LOC106605011 coding upstream 118522 43630465 ~ 43651752 (+)
LOC110501593 pigv coding upstream 170847 43597314 ~ 43599427 (+)
LOC110490199 NA coding upstream 173915 43570290 ~ 43596359 (+)
LOC110501584 NA coding upstream 211337 43551582 ~ 43558937 (+)
LOC110490176 NA coding upstream 416613 43351127 ~ 43353661 (+)
LOC110490316 LOC106584327 coding downstream 176327 43947088 ~ 43950347 (+)
LOC110490326 LOC106605007 coding downstream 184288 43955049 ~ 43960992 (+)
LOC110490388 LOC106604983 coding downstream 694213 44464974 ~ 44472924 (+)
LOC110490437 LOC106584212 coding downstream 780402 44551163 ~ 44553979 (+)
LOC110490546 LOC106560730 coding downstream 1432548 45203309 ~ 45255843 (+)
G146092 NA non-coding upstream 556 43769456 ~ 43769718 (+)
G146040 NA non-coding upstream 2994 43766882 ~ 43767280 (+)
G146083 NA non-coding upstream 9865 43760101 ~ 43760409 (+)
G146078 NA non-coding upstream 15198 43754854 ~ 43755076 (+)
G146074 NA non-coding upstream 19816 43750173 ~ 43750458 (+)
G146095 NA non-coding downstream 951 43771712 ~ 43771946 (+)
G146098 NA non-coding downstream 3654 43774415 ~ 43774851 (+)
G146099 NA non-coding downstream 4260 43775021 ~ 43775867 (+)
G146105 NA non-coding downstream 14573 43785334 ~ 43785538 (+)
G146108 NA non-coding downstream 19742 43790503 ~ 43790710 (+)
G146091 NA other upstream 1112 43768707 ~ 43769162 (+)
G146054 LOC100136012 other upstream 39056 43730872 ~ 43731218 (+)
G144661 NA other upstream 1204244 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 1800957 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 2228683 41539240 ~ 41541654 (+)
G146114 NA other downstream 28643 43799404 ~ 43799853 (+)
G146165 NA other downstream 115835 43886596 ~ 43889609 (+)
G146226 NA other downstream 226019 43996780 ~ 43997065 (+)
G146841 NA other downstream 658392 44429153 ~ 44429393 (+)
G147510 NA other downstream 1100039 44870800 ~ 44871500 (+)

Expression


G146093 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
End of interactive chart.

G146093 Expression in each Bioproject

Bar chart with 15 bars.
G146093 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network