G146099


Basic Information

Item Value
gene id G146099
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 43775021 ~ 43775867 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU167673
CCTTGGGCCTTCGTTTGAACTAAGAGCAGTGTTTGCATTGGCTTGAGAGACTGGGAGAAGTTAAATACTATACACAAACAGAAAAATCATATTTCTCAATTATTTGCTCCATGTGGCATGTGAGAGTATTTTTCAAAACAGTAGTTTTTCAAAATTGTTATTAGTTTGCTTCCTAGTAAAAGTGAATGGAGAATCATAATGTATAGGTCTGTTGGAGAGCTAAAATGTACCTTATATACGTAACAATTCAATATTACAGCATTTTCTTCCTCACTATAGACGCGTCACATCATAAGCTCATTTCTATAGTATCCTTTCAACGTTTCACATTCTGGTGAGATTCAGTGGCTTGGTGTCAGTTCAAAATGTTGTTCTACACCACTGACAAATGAAcagtcatatactgtacattacatagTTTAGAAATGGCCTATTCAATCTCACCTATTCCTGCATGCAGTGCAGGGAGTTCTTCACACAACTCTAAAGTTACCTTTTACTTTTCCACACATACCTCATGAATtaacaatacatacagtatgatGTGGAGTGATAATGATTTATATGATTCCGTAAATTCAAAGTGCTCAGTCATTGCTTATTAGGTGTTTCCCTTTCTGTCCCAGTTATTGATCTAAGTATACACCaggaaaaaaaaagaagaatccAGGCAACTTGTATTACTGAACATGCTTCCTGTCTCTTATCCCATGGGCTAGACGTGTTCTGTATCGCACCATAAAACAATAACACAGGAGAATCGGCCACATGACTTGGGTGCAATTCCTCGTCCCTTGACATTTCCTTTATAATATGTTCTGTTGCAGGGTTATAAACCAAAGAAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167673 True 847 lncRNA 0.46 1 43775021 43775867

Neighbor

gene id symbol gene type direction distance location
LOC110490231 LOC106605011 coding upstream 123269 43630465 ~ 43651752 (+)
LOC110501593 pigv coding upstream 175594 43597314 ~ 43599427 (+)
LOC110490199 NA coding upstream 178662 43570290 ~ 43596359 (+)
LOC110501584 NA coding upstream 216084 43551582 ~ 43558937 (+)
LOC110490176 NA coding upstream 421360 43351127 ~ 43353661 (+)
LOC110490316 LOC106584327 coding downstream 171221 43947088 ~ 43950347 (+)
LOC110490326 LOC106605007 coding downstream 179182 43955049 ~ 43960992 (+)
LOC110490388 LOC106604983 coding downstream 689107 44464974 ~ 44472924 (+)
LOC110490437 LOC106584212 coding downstream 775296 44551163 ~ 44553979 (+)
LOC110490546 LOC106560730 coding downstream 1427442 45203309 ~ 45255843 (+)
G146098 NA non-coding upstream 170 43774415 ~ 43774851 (+)
G146095 NA non-coding upstream 3075 43771712 ~ 43771946 (+)
G146093 NA non-coding upstream 4260 43770274 ~ 43770761 (+)
G146092 NA non-coding upstream 5303 43769456 ~ 43769718 (+)
G146040 NA non-coding upstream 7741 43766882 ~ 43767280 (+)
G146105 NA non-coding downstream 9467 43785334 ~ 43785538 (+)
G146108 NA non-coding downstream 14636 43790503 ~ 43790710 (+)
G146110 NA non-coding downstream 16845 43792712 ~ 43792936 (+)
G146113 NA non-coding downstream 22700 43798567 ~ 43798818 (+)
G146130 NA non-coding downstream 57649 43833516 ~ 43833738 (+)
G146091 NA other upstream 5859 43768707 ~ 43769162 (+)
G146054 LOC100136012 other upstream 43803 43730872 ~ 43731218 (+)
G144661 NA other upstream 1208991 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 1805704 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 2233430 41539240 ~ 41541654 (+)
G146114 NA other downstream 23537 43799404 ~ 43799853 (+)
G146165 NA other downstream 110729 43886596 ~ 43889609 (+)
G146226 NA other downstream 220913 43996780 ~ 43997065 (+)
G146841 NA other downstream 653286 44429153 ~ 44429393 (+)
G147510 NA other downstream 1094933 44870800 ~ 44871500 (+)

Expression


Co-expression Network