G146165


Basic Information

Item Value
gene id G146165
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 43886596 ~ 43889609 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU167748
ggctagagcaaggcccgcctccaaccctccgaccagtcaagaagaccgaaacgacaagactccacctactttattctatgtataaaaatgtatgtaaccattgtataggcctctttttcacctggctccttgccgagttatgtgaactaggtccgtgcacgtaaaactgcgggacaagatatctctgactcattaaaactgtcttttgttacaactgaaatccactctgtccaacgTCCGTGATTtagtctcaactctccagtttttgaacactaacagaattggtagcagaggatggttgttcttgaattcgatctattataagttagtgtgagaggacgagactgatcacggctaaaaaatcagacggaagagtgacttccccagccattcatcttgcctcaggaaatctgatcggagcgctctatataaaggtgagcagagcccgttatatcgaaatctgcatattgtattatagtctaaaccaaattttgatcagaaagtactgggcgtgagtatgaatcggtgcccaatttttttacataagaacctaagacattgattaaagatatcttgttttgtaaaaaaaaaatatatatacatattcttattaatgggcctatactcagttattttaataggaatgtgtgaattgtgattgaccaatgtgttaaattcctccagggaccctatttgttctgaaatctgcatagaaaactgtcctaattatatatgtattgggttgtgtatagaggtgacgttaaatagtggctgtgttttaacacgtaatggacacaattatggatgttggaaattcaatgagaatttcatacgaatgaatgaattatagatgaaccgaatctgcaagtaaggtcttgtggaggtgtggttatagatgaaccgaatctgcaagtaaggtcttgtggaggtgtggttatagatgaaccgaatctgcaagtaaggtcttgtggaggtgtggttatagtttaatgatagatgaaccgaatctgcaagtaaaaatttcctattttgatacgttctgtactatcgaataaggtcttgtggaggtgtggttatagttgaatgatagatgaaccggatctgcaagtaaaatctcctgttgatacatataacatcgaataggtcttgtggaggtgtggttggattgaatgaatctgcatgaaaaatgccctattaaaaaagctgtgtattatttaataggttttgtaagaggtgtagtcgagtagatacaggatatgtaagtttggccttccactagacagagatcgggaatgatgtggctattgcacatcaaacaataaacataagatgaaccagagttgacattccatgatttggagatgggggaaattaaattgaaagaaacgtttgtcgcggagtaggttgggatacgtaactgggctattatGCACACGTGCTGGtagacaaagccaccttagtatcgaatggccgtgcaattttgattgacagcagccgggccgaaatactgattttcgttttttttcattcctgttgatattgcctaaagtttaaaattattctgacaattgctatagaatcgctggaatttactgatataagttcataaaggaacttactgaattgtttctagaaagtatttaaataagccgCCGAGCTTAATACAGACTTTGTTTTACAGACGCTAAAAGCTACACACTGATTTTGGGGTTTttctattctatccatatttcctaaatatatagaattattctgacaattgctatagaatcgctcgaatttactgatataagttcataaaggaatttactgaattgtttacagaaagtatttaaataattcactgaacaactcttagttgtctagaaattctatcgatatttcctaaagagctagaattactctgaaaattgttatagaaccgcatatattcactgatatattgttccaaaaggaaatcgcagaatcatttatagaaaatacctaaacgaatcgctgaacaaattcaaataaaataccggtGAAATACacacgtggcgggcgtcacatattgataaccccctttgtctcgaccagggacaggctaagcatacaacgatagaaataaacaccacatagtaaggattgaatatacctaaataacgcattatacacattatcagacgacttagataaaatgtctgcagccatCACGCCCAAACAAATGATTGCAGTAGAAACTCAAGACCAAGGGGAGCAGCCAGATAACACTCAGATCGTGGCACAGACTGTCtctcagatgatccaacagcagACAGCCCCACCACCCCATTACCCTCCCCCACAGCGGTATATCCTGCAGGCAACGGGCTCAACGAGGCCCCTACACTGGACCATACAGAGGGGGAAACTACCAGTGGTATAACTGAGGAATTCCCGGTCACTATGCCAGATATTGCACGAAACCACTCTCCCCgcagcaacagcaatggagagaaagaggaagaggacgtggaggggcaccaggaagaggaagaggacccTCTCCTAGACacatgcagcaggagcagcaagattacaaccaaccctcccacttcaacacctgatcacccagtaagaatgatgaggatgccactcctgccgatgaccacactgtctgaagcccaagaagtgtactggctaaaatgcctacccacagggcctgccacccctcacatccagtttaagttcaaccaactgaaagctcaaatctacactctgcacccatataagactccccaagctgagatccattgcacactcaatgcaacagaaactgatgactgcctctacactgcagactgggacgaagacatgatgcacctgaccccatctatcaggtgttgtaccattgggtgtggcccagagggggtggcagcaccggtcatcctacgatcaaggaacctccatgcacccctggcctggacggctgaagcatcaacagccatagc
>TU167746
gttctgaaatctgcatagaaaactgtcctaattatatatgtattgggttgtgtatagaggtgacgttaaatagtggctgtgttttaacacgtaatggacacaattatggatgttggaaattcaatgagaatttcatacgaatgaatgaattatagatgaaccgaatctgcaagtaaggtcttgtggaggtgtggttatagatgaaccgaatctgcaagtaaggtcttgtggaggtgtggttatagatgaaccgaatctgcaagtaaggtcttgtggaggtgtggttatagatgaaccgaatctgcaagtaaggtcttgtggaggtgtggttatagttgaatgatagatgaaccggatctgcaagtaaaatctcctgttgatacatataacatcgaataggtcttgtggaggtgtggttggattgaatgaatctgcatgaaaaatgccctattaaaaaagctgtgtattatttaataggttttgtaagaggtgtagtcgagtagatacaggatatgtaagtttggccttccactagacagagatcgggaatgatgtggctattgcacatcaaacaataaacataagatgaaccagagttgacattccatgatttggagatgggggaaattaaattgaaagaaacgtttgtcgcggagtaggttgggatacgtaactgggctattatGCACACGTGCTGGtagacaaagccaccttagtatcgaatggccgtgcaattttgattgacagcagccgggccgaaatactgattttcgttttttttcattcctgttgatattgcctaaagtttaaaattattctgacaattgctatagaatcgctggaatttactgatataagttcataaaggaacttactgaattgtttctagaaagtatttaaataagccgCCGAGCTTAATACAGACTTTGTTTTACAGACGCTAAAAGCTACACACTGATTTTGGGGTTTttctattctatccatatttcctaaatatatagaattattctgacaattgctatagaatcgctcgaatttactgatataagttcataaaggaatttactgaattgtttacagaaagtatttaaataattcactgaacaactcttagttgtctagaaattctatcgatatttcctaaagagctagaattactctgaaaattgttatagaaccgcatatattcactgatatattgttccaaaaggaaatcgcagaatcatttatagaaaatacctaaacgaatcgctgaacaaattcaaataaaataccggtGAAATACacacgtggcgggcgtcacatattgataaccccctttgtctcgaccagggacaggctaagcatacaacgatagaaataaacaccacatagtaaggattgaatatacctaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167748 False 2969 TUCP 0.41 2 43886596 43889609
TU167746 True 1396 lncRNA 0.39 2 43887291 43888780

Neighbor

gene id symbol gene type direction distance location
LOC110490231 LOC106605011 coding upstream 235539 43630465 ~ 43651752 (+)
LOC110501593 pigv coding upstream 287864 43597314 ~ 43599427 (+)
LOC110490199 NA coding upstream 290932 43570290 ~ 43596359 (+)
LOC110501584 NA coding upstream 328354 43551582 ~ 43558937 (+)
LOC110490176 NA coding upstream 533630 43351127 ~ 43353661 (+)
LOC110490316 LOC106584327 coding downstream 58308 43947088 ~ 43950347 (+)
LOC110490326 LOC106605007 coding downstream 66269 43955049 ~ 43960992 (+)
LOC110490388 LOC106604983 coding downstream 576194 44464974 ~ 44472924 (+)
LOC110490437 LOC106584212 coding downstream 662383 44551163 ~ 44553979 (+)
LOC110490546 LOC106560730 coding downstream 1314529 45203309 ~ 45255843 (+)
G146130 NA non-coding upstream 53553 43833516 ~ 43833738 (+)
G146113 NA non-coding upstream 88473 43798567 ~ 43798818 (+)
G146110 NA non-coding upstream 94355 43792712 ~ 43792936 (+)
G146108 NA non-coding upstream 96581 43790503 ~ 43790710 (+)
G146105 NA non-coding upstream 101753 43785334 ~ 43785538 (+)
G146168 NA non-coding downstream 4556 43893336 ~ 43897240 (+)
G146171 NA non-coding downstream 8138 43896918 ~ 43917778 (+)
G146201 NA non-coding downstream 75789 43964569 ~ 43965697 (+)
G146221 NA non-coding downstream 100372 43989152 ~ 43989351 (+)
G146238 NA non-coding downstream 125252 44014032 ~ 44014243 (+)
G146114 NA other upstream 87438 43799404 ~ 43799853 (+)
G146091 NA other upstream 118129 43768707 ~ 43769162 (+)
G146054 LOC100136012 other upstream 156073 43730872 ~ 43731218 (+)
G144661 NA other upstream 1321261 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 1917974 41968374 ~ 41969317 (+)
G146226 NA other downstream 108000 43996780 ~ 43997065 (+)
G146841 NA other downstream 540373 44429153 ~ 44429393 (+)
G147510 NA other downstream 982020 44870800 ~ 44871500 (+)
G148191 NA other downstream 1583302 45472082 ~ 45492379 (+)
uevld uevld other downstream 3092939 46981686 ~ 47007672 (+)

Expression


Co-expression Network