G146171


Basic Information

Item Value
gene id G146171
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 43896918 ~ 43917778 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU167759
cctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaagatttcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcactacaaagtattaacttaggggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU167759 True 288 lncRNA 0.54 2 43896918 43917778

Neighbor

gene id symbol gene type direction distance location
LOC110490231 LOC106605011 coding upstream 245166 43630465 ~ 43651752 (+)
LOC110501593 pigv coding upstream 297491 43597314 ~ 43599427 (+)
LOC110490199 NA coding upstream 300559 43570290 ~ 43596359 (+)
LOC110501584 NA coding upstream 337981 43551582 ~ 43558937 (+)
LOC110490176 NA coding upstream 543257 43351127 ~ 43353661 (+)
LOC110490316 LOC106584327 coding downstream 29310 43947088 ~ 43950347 (+)
LOC110490326 LOC106605007 coding downstream 37271 43955049 ~ 43960992 (+)
LOC110490388 LOC106604983 coding downstream 547196 44464974 ~ 44472924 (+)
LOC110490437 LOC106584212 coding downstream 633385 44551163 ~ 44553979 (+)
LOC110490546 LOC106560730 coding downstream 1285531 45203309 ~ 45255843 (+)
G146165 NA non-coding upstream 8138 43886596 ~ 43889609 (+)
G146130 NA non-coding upstream 63180 43833516 ~ 43833738 (+)
G146113 NA non-coding upstream 98100 43798567 ~ 43798818 (+)
G146110 NA non-coding upstream 103982 43792712 ~ 43792936 (+)
G146108 NA non-coding upstream 106208 43790503 ~ 43790710 (+)
G146201 NA non-coding downstream 46791 43964569 ~ 43965697 (+)
G146221 NA non-coding downstream 71374 43989152 ~ 43989351 (+)
G146238 NA non-coding downstream 96254 44014032 ~ 44014243 (+)
G146245 NA non-coding downstream 103213 44020991 ~ 44021229 (+)
G146645 NA non-coding downstream 280879 44198657 ~ 44203445 (+)
G146114 NA other upstream 97065 43799404 ~ 43799853 (+)
G146091 NA other upstream 127756 43768707 ~ 43769162 (+)
G146054 LOC100136012 other upstream 165700 43730872 ~ 43731218 (+)
G144661 NA other upstream 1330888 42510330 ~ 42566030 (+)
G146226 NA other downstream 79002 43996780 ~ 43997065 (+)
G146841 NA other downstream 511375 44429153 ~ 44429393 (+)
G147510 NA other downstream 953022 44870800 ~ 44871500 (+)
G148191 NA other downstream 1554304 45472082 ~ 45492379 (+)
uevld uevld other downstream 3063941 46981686 ~ 47007672 (+)

Expression


Co-expression Network