G146201


Basic Information

Item Value
gene id G146201
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 43964569 ~ 43965697 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU167790
gcttttcgtttttttttttcaccctTTATATGCAAATGCTGCTGCATGCATATAGATAATATCCCCATAGTCGAAAATAGACATTTAAGTGGCCTGGACAATTTCCTTCCTTTAACAAAAGTCAGACATGTGTCATgatgttgccctctttgggtacagcaagccccatccccctctccctgtctcctacacacaggctgctgtggtcagagagaggtcgtaaattcctggaggatattatctcctcatggccacagtatacagacagagtgaattttcatagagaacaaaggaatatCTTCCActtcacagaacttgaggtccgaacaacatttatgttctggagaaggtataaaagatcggtgtaGAATCCAGCTACAAACTGGTTCGTTTGGTACAATTTGGTGAAACTCATGGAAGAGAATAcgaccacattaccataacgctgtttatataacagcctcagatatgaggtttacatctaattgttgtataagatgaatgagtgaggataatactgtttgtaaaattgtgtaatgtgattttggactgtttaatgaaggaaactccaattcccttttgagtttaactaaatcagaggaccgcccatgagcccagttagggtctgGCATactgggacaggcccttttctgcaactcccgaataaaacccccactttgataatttctcaacagaccatgtttcccTCAATTGCGAGAGGACAAACGTTTGAGTagactgctgaatcttttaaccatcccacgtggttaactctgagactatcgatactgacagaataagaacaagtctttgatattaattactagtctgcagctaggaattcggtaaccacCGAAATATCTATCCATAACAAcctgaatgaatgtcactctgaactattcattctaaccacgacagagagggcggacaaactctccaacagaaactaacttttcaacagagatcccCGACGACACATTgaacgtaaatatatatattgattgcaattgttcccgaatgagtgagcgttcatgtgcaaaggattagcatttcaattgttagaattatcaactgtgtgttgtcttatctcagtcgacccccactccC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167790 True 1107 lncRNA 0.41 2 43964569 43965697

Neighbor

gene id symbol gene type direction distance location
LOC110490326 LOC106605007 coding upstream 3577 43955049 ~ 43960992 (+)
LOC110490316 LOC106584327 coding upstream 14222 43947088 ~ 43950347 (+)
LOC110490231 LOC106605011 coding upstream 312817 43630465 ~ 43651752 (+)
LOC110501593 pigv coding upstream 365142 43597314 ~ 43599427 (+)
LOC110490199 NA coding upstream 368210 43570290 ~ 43596359 (+)
LOC110490388 LOC106604983 coding downstream 499277 44464974 ~ 44472924 (+)
LOC110490437 LOC106584212 coding downstream 585466 44551163 ~ 44553979 (+)
LOC110490546 LOC106560730 coding downstream 1237612 45203309 ~ 45255843 (+)
tsg101a tsg101 coding downstream 1478376 45444073 ~ 45468845 (+)
brsk2a LOC106560719 coding downstream 1630306 45596003 ~ 46132114 (+)
G146171 NA non-coding upstream 46791 43896918 ~ 43917778 (+)
G146168 NA non-coding upstream 67329 43893336 ~ 43897240 (+)
G146165 NA non-coding upstream 75789 43886596 ~ 43889609 (+)
G146130 NA non-coding upstream 130831 43833516 ~ 43833738 (+)
G146113 NA non-coding upstream 165751 43798567 ~ 43798818 (+)
G146221 NA non-coding downstream 23455 43989152 ~ 43989351 (+)
G146238 NA non-coding downstream 48335 44014032 ~ 44014243 (+)
G146245 NA non-coding downstream 55294 44020991 ~ 44021229 (+)
G146645 NA non-coding downstream 232960 44198657 ~ 44203445 (+)
G146671 NA non-coding downstream 241758 44207455 ~ 44207708 (+)
G146114 NA other upstream 164716 43799404 ~ 43799853 (+)
G146091 NA other upstream 195407 43768707 ~ 43769162 (+)
G146054 LOC100136012 other upstream 233351 43730872 ~ 43731218 (+)
G144661 NA other upstream 1398539 42510330 ~ 42566030 (+)
G146226 NA other downstream 31083 43996780 ~ 43997065 (+)
G146841 NA other downstream 463456 44429153 ~ 44429393 (+)
G147510 NA other downstream 905103 44870800 ~ 44871500 (+)
G148191 NA other downstream 1506385 45472082 ~ 45492379 (+)
uevld uevld other downstream 3016022 46981686 ~ 47007672 (+)

Expression


Co-expression Network