Gene
RNA
| Item | Value |
|---|---|
| gene id | G146515 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 43989043 ~ 43989336 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU168135 | True | 294 | lncRNA | 0.52 | 1 | 43989043 | 43989336 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940359 | NA | coding | downstream | 60762 | 43924190 ~ 43928281 (-) |
| LOC118940358 | LOC106584332 | coding | downstream | 65306 | 43922960 ~ 43923737 (-) |
| LOC110490306 | LOC106584341 | coding | downstream | 111241 | 43809668 ~ 43877802 (-) |
| LOC110490298 | LOC106605170 | coding | downstream | 205159 | 43776063 ~ 43783884 (-) |
| LOC110490292 | LOC106605010 | coding | downstream | 228693 | 43698959 ~ 43760350 (-) |
| LOC110490335 | ptpru | coding | upstream | 95224 | 44084560 ~ 44422885 (-) |
| LOC110490352 | NA | coding | upstream | 446588 | 44434790 ~ 44464449 (-) |
| LOC110490449 | scmh1 | coding | upstream | 584106 | 44571948 ~ 44606865 (-) |
| LOC118940389 | NA | coding | upstream | 740756 | 44730092 ~ 44737978 (-) |
| LOC110501618 | LOC106573044 | coding | upstream | 768062 | 44757398 ~ 45073140 (-) |
| G146504 | NA | non-coding | downstream | 15001 | 43973541 ~ 43974042 (-) |
| G146462 | NA | non-coding | downstream | 36583 | 43896420 ~ 43952460 (-) |
| G146467 | NA | non-coding | downstream | 38692 | 43946687 ~ 43950351 (-) |
| G146420 | NA | non-coding | downstream | 188386 | 43800150 ~ 43800657 (-) |
| G146416 | NA | non-coding | downstream | 194723 | 43794113 ~ 43794320 (-) |
| G146524 | NA | non-coding | upstream | 9931 | 43999267 ~ 43999567 (-) |
| G146528 | NA | non-coding | upstream | 13972 | 44003308 ~ 44003721 (-) |
| G146534 | NA | non-coding | upstream | 20265 | 44009601 ~ 44009807 (-) |
| G146959 | NA | non-coding | upstream | 54397 | 44043733 ~ 44137280 (-) |
| G147080 | NA | non-coding | upstream | 209257 | 44198593 ~ 44203502 (-) |
| LOC110490183 | LOC106605015 | other | downstream | 596914 | 43372725 ~ 43392160 (-) |
| G145767 | NA | other | downstream | 716527 | 43270717 ~ 43272516 (-) |
| G145010 | NA | other | downstream | 1281764 | 42706818 ~ 42707279 (-) |
| LOC110489860 | LOC106605053 | other | downstream | 2258621 | 41714269 ~ 41730507 (-) |
| G147800 | NA | other | upstream | 873749 | 44863085 ~ 44863559 (-) |
| LOC110490531 | LOC106560723 | other | upstream | 1145232 | 45134476 ~ 45168260 (-) |
| tmem86a | tmem86a | other | upstream | 2854844 | 46844180 ~ 46921608 (-) |
