G146238


Basic Information

Item Value
gene id G146238
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 44014032 ~ 44014243 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU167828
ctctattagtatttggtagcattgcctttacatttttggacttgggtcaaatgttttgggtagccttccacaagcttcccacaataagttgggtgaattttggcccattcctcctgacagatctggtgtaactgagtcggaTTTCTAGGCCTCATTGCTTGCAAATGCTTATTCAGTTCTGCCGACAAATTTTagaggactgaggtcagggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167828 True 212 lncRNA 0.44 1 44014032 44014243

Neighbor

gene id symbol gene type direction distance location
LOC110490326 LOC106605007 coding upstream 53040 43955049 ~ 43960992 (+)
LOC110490316 LOC106584327 coding upstream 63685 43947088 ~ 43950347 (+)
LOC110490231 LOC106605011 coding upstream 362280 43630465 ~ 43651752 (+)
LOC110501593 pigv coding upstream 414605 43597314 ~ 43599427 (+)
LOC110490199 NA coding upstream 417673 43570290 ~ 43596359 (+)
LOC110490388 LOC106604983 coding downstream 450731 44464974 ~ 44472924 (+)
LOC110490437 LOC106584212 coding downstream 536920 44551163 ~ 44553979 (+)
LOC110490546 LOC106560730 coding downstream 1189066 45203309 ~ 45255843 (+)
tsg101a tsg101 coding downstream 1429830 45444073 ~ 45468845 (+)
brsk2a LOC106560719 coding downstream 1581760 45596003 ~ 46132114 (+)
G146221 NA non-coding upstream 24681 43989152 ~ 43989351 (+)
G146201 NA non-coding upstream 48335 43964569 ~ 43965697 (+)
G146171 NA non-coding upstream 96254 43896918 ~ 43917778 (+)
G146168 NA non-coding upstream 116792 43893336 ~ 43897240 (+)
G146165 NA non-coding upstream 125252 43886596 ~ 43889609 (+)
G146245 NA non-coding downstream 6748 44020991 ~ 44021229 (+)
G146645 NA non-coding downstream 184414 44198657 ~ 44203445 (+)
G146671 NA non-coding downstream 193212 44207455 ~ 44207708 (+)
G146676 NA non-coding downstream 203374 44217617 ~ 44218066 (+)
G146843 NA non-coding downstream 416642 44430885 ~ 44431145 (+)
G146226 NA other upstream 16967 43996780 ~ 43997065 (+)
G146114 NA other upstream 214179 43799404 ~ 43799853 (+)
G146091 NA other upstream 244870 43768707 ~ 43769162 (+)
G146054 LOC100136012 other upstream 282814 43730872 ~ 43731218 (+)
G146841 NA other downstream 414910 44429153 ~ 44429393 (+)
G147510 NA other downstream 856557 44870800 ~ 44871500 (+)
G148191 NA other downstream 1457839 45472082 ~ 45492379 (+)
uevld uevld other downstream 2967476 46981686 ~ 47007672 (+)
G150997 NA other downstream 3483705 47497948 ~ 47547579 (+)

Expression


Co-expression Network