G146676


Basic Information

Item Value
gene id G146676
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 44217617 ~ 44218066 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU168299
CAGAAATGTTGGTGGTGATCTCAGTTAGGGCGGTCTGGCCGAAGCCCTTGGTTGTGCGAGCACGGACAGAAATCAGATATGTAGTGCCAGGGTGAAGGTTGGAGAACATGTGATAGGTCTCGTTCCTCAGCTTCGACACTGTTCTCCTAGGTCCTGGCACATTGATGCCTGGGTCAGACGACTCAATGCTCTGATAGCTGATCTGTGGACAGATAAATACAAAAAAGACACCAGAATGATTCATATAGCAATTATTTCTGAGAACAGGAGTTATTTACTTTGTGGAGCAACTACCTTTTAACTTTTGTTCAATTGATTTTCTCTGAGGATTCACATCTGACTTTGAAAATTGTGCTTCTGCTCTAAGTCAATGTACTTAATGGTAATGttgcttttcaaatcaaattgtattaatcACGTGCTTAGTAAACAACACAGTGTGTACAATGC

Function

NR:

description
receptor-type tyrosine-protein phosphatase U-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168299 True 450 lncRNA 0.41 1 44217617 44218066

Neighbor

gene id symbol gene type direction distance location
LOC110490326 LOC106605007 coding upstream 256625 43955049 ~ 43960992 (+)
LOC110490316 LOC106584327 coding upstream 267270 43947088 ~ 43950347 (+)
LOC110490231 LOC106605011 coding upstream 565865 43630465 ~ 43651752 (+)
LOC110501593 pigv coding upstream 618190 43597314 ~ 43599427 (+)
LOC110490199 NA coding upstream 621258 43570290 ~ 43596359 (+)
LOC110490388 LOC106604983 coding downstream 246908 44464974 ~ 44472924 (+)
LOC110490437 LOC106584212 coding downstream 333097 44551163 ~ 44553979 (+)
LOC110490546 LOC106560730 coding downstream 985243 45203309 ~ 45255843 (+)
tsg101a tsg101 coding downstream 1226007 45444073 ~ 45468845 (+)
brsk2a LOC106560719 coding downstream 1377937 45596003 ~ 46132114 (+)
G146671 NA non-coding upstream 9909 44207455 ~ 44207708 (+)
G146645 NA non-coding upstream 14172 44198657 ~ 44203445 (+)
G146245 NA non-coding upstream 196388 44020991 ~ 44021229 (+)
G146238 NA non-coding upstream 203374 44014032 ~ 44014243 (+)
G146221 NA non-coding upstream 228266 43989152 ~ 43989351 (+)
G146843 NA non-coding downstream 212819 44430885 ~ 44431145 (+)
G146845 NA non-coding downstream 214627 44432693 ~ 44432901 (+)
G146848 NA non-coding downstream 217020 44435086 ~ 44435726 (+)
G146850 NA non-coding downstream 223804 44441870 ~ 44442187 (+)
G147346 NA non-coding downstream 389607 44607673 ~ 44608027 (+)
G146226 NA other upstream 220552 43996780 ~ 43997065 (+)
G146165 NA other upstream 328008 43886596 ~ 43889609 (+)
G146114 NA other upstream 417764 43799404 ~ 43799853 (+)
G146091 NA other upstream 448455 43768707 ~ 43769162 (+)
G146054 LOC100136012 other upstream 486399 43730872 ~ 43731218 (+)
G146841 NA other downstream 211087 44429153 ~ 44429393 (+)
G147510 NA other downstream 652734 44870800 ~ 44871500 (+)
G148191 NA other downstream 1254016 45472082 ~ 45492379 (+)
uevld uevld other downstream 2763653 46981686 ~ 47007672 (+)
G150997 NA other downstream 3279882 47497948 ~ 47547579 (+)

Expression


Co-expression Network