G146848


Basic Information

Item Value
gene id G146848
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 44435086 ~ 44435726 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU168478
tcgttgcccgggcggtatgtttgggatcattgtcatgctgaaagacccagccacgtttcatcttcaatgcccttgctgatggtaggctttgttactttggtcccagctctctgcaggtcattcactaggtcccccccgtgtggttctgggatttttgctcaccggtcttgtgatcattttgaccccacagggtgagatcttgcgtggaaccccagatcgagggagattatcagtggtcttgtatgtcttccatttcctaataattgctcccacagttgatttcttcaaaccaagctgcttacctattgcagattcagtcttcccagcctggtgcaggtctacaattgtgtttctggtgtcctttgacagctctttggtcttggccatagtggagtttggagtgtgactgtttgaggttgtggacaggtgtcttttatactgataacaagttcaaacaggtgccatcaaatcaaatcaaatgtatttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaactccaaacagcaagcaaagcaggtgtagaagcacggtggctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaacca

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU168478 True 641 lncRNA 0.40 1 44435086 44435726

Neighbor

gene id symbol gene type direction distance location
LOC110490326 LOC106605007 coding upstream 474094 43955049 ~ 43960992 (+)
LOC110490316 LOC106584327 coding upstream 484739 43947088 ~ 43950347 (+)
LOC110490231 LOC106605011 coding upstream 783334 43630465 ~ 43651752 (+)
LOC110501593 pigv coding upstream 835659 43597314 ~ 43599427 (+)
LOC110490199 NA coding upstream 838727 43570290 ~ 43596359 (+)
LOC110490388 LOC106604983 coding downstream 29248 44464974 ~ 44472924 (+)
LOC110490437 LOC106584212 coding downstream 115437 44551163 ~ 44553979 (+)
LOC110490546 LOC106560730 coding downstream 767583 45203309 ~ 45255843 (+)
tsg101a tsg101 coding downstream 1008347 45444073 ~ 45468845 (+)
brsk2a LOC106560719 coding downstream 1160277 45596003 ~ 46132114 (+)
G146845 NA non-coding upstream 2185 44432693 ~ 44432901 (+)
G146843 NA non-coding upstream 3941 44430885 ~ 44431145 (+)
G146676 NA non-coding upstream 217020 44217617 ~ 44218066 (+)
G146671 NA non-coding upstream 227378 44207455 ~ 44207708 (+)
G146645 NA non-coding upstream 231641 44198657 ~ 44203445 (+)
G146850 NA non-coding downstream 6144 44441870 ~ 44442187 (+)
G147346 NA non-coding downstream 171947 44607673 ~ 44608027 (+)
G147347 NA non-coding downstream 173982 44609708 ~ 44612919 (+)
G147348 NA non-coding downstream 175496 44611222 ~ 44611884 (+)
G147349 NA non-coding downstream 179336 44615062 ~ 44617145 (+)
G146841 NA other upstream 5693 44429153 ~ 44429393 (+)
G146226 NA other upstream 438021 43996780 ~ 43997065 (+)
G146165 NA other upstream 545477 43886596 ~ 43889609 (+)
G146114 NA other upstream 635233 43799404 ~ 43799853 (+)
G146091 NA other upstream 665924 43768707 ~ 43769162 (+)
G147510 NA other downstream 435074 44870800 ~ 44871500 (+)
G148191 NA other downstream 1036356 45472082 ~ 45492379 (+)
uevld uevld other downstream 2545993 46981686 ~ 47007672 (+)
G150997 NA other downstream 3062222 47497948 ~ 47547579 (+)
G152167 NA other downstream 4121056 48556782 ~ 48557686 (+)

Expression


Co-expression Network