G147291


Basic Information

Item Value
gene id G147291
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 44517962 ~ 44518789 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU168942
ccacatcctgccaaattccagctgcgctaattgtattgtgttcacagagctcacaagctatcagaaagttgtatggcaaccacctccggtgccaaatagaactggcagacatagacattcagtacaagaagaaaaagatggaaaatcttgcactggagttcgaaataaaaaagaggacaattaggaaactggaccttgaaataaaaaaacttgagagggagctccaagaagatgacacagctcaaaataaaaattagcaatcagtacaaccaagtcatcgttataaggcatcgccctcttttgcccacccccccccagcaccaggtgtggccactagcctatatgaaggcccaaaattgtgtgttcctttctgctctgacaatggcatgcccattcgtgcgagatgtggtggatgaagaagcacttgtgctgaggagagccttcaggtgagaaagggtcttcagggaccggttggacccactggccttccctgatgaccatctatatgaaagatacaggttttctgcagatggcatcaggtatctatgcagactactgggtcccaggattaagcaccgcactgcacggagccatgcactgagtgtggagcaaatggtttgtgtggccttgcgcttttttgctagtggagcc

Function

NR:

description
PREDICTED: putative nuclease HARBI1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU168942 True 651 lncRNA 0.47 3 44517962 44518789

Neighbor

gene id symbol gene type direction distance location
LOC110490352 NA coding downstream 53513 44434790 ~ 44464449 (-)
LOC110490335 ptpru coding downstream 95077 44084560 ~ 44422885 (-)
LOC118940359 NA coding downstream 589681 43924190 ~ 43928281 (-)
LOC118940358 LOC106584332 coding downstream 594225 43922960 ~ 43923737 (-)
LOC110490306 LOC106584341 coding downstream 640160 43809668 ~ 43877802 (-)
LOC110490449 scmh1 coding upstream 54653 44571948 ~ 44606865 (-)
LOC118940389 NA coding upstream 211303 44730092 ~ 44737978 (-)
LOC110501618 LOC106573044 coding upstream 238609 44757398 ~ 45073140 (-)
LOC110501628 LOC106588271 coding upstream 604924 45123713 ~ 45124844 (-)
LOC110490531 LOC106560723 coding upstream 615687 45134476 ~ 45168260 (-)
G147267 NA non-coding downstream 35251 44482458 ~ 44482711 (-)
G147266 NA non-coding downstream 37008 44480597 ~ 44480954 (-)
G147224 LOC106604983 non-coding downstream 50524 44466235 ~ 44467438 (-)
G147091 NA non-coding downstream 301478 44215687 ~ 44216484 (-)
G147080 NA non-coding downstream 314460 44198593 ~ 44203502 (-)
G147352 NA non-coding upstream 90784 44609573 ~ 44623234 (-)
G147354 NA non-coding upstream 120171 44638960 ~ 44639277 (-)
G147434 NA non-coding upstream 235186 44753975 ~ 44754206 (-)
G147791 NA non-coding upstream 335380 44854169 ~ 44858589 (-)
LOC110490298 LOC106605170 other downstream 734243 43776063 ~ 43783884 (-)
LOC110490183 LOC106605015 other downstream 1125833 43372725 ~ 43392160 (-)
G145767 NA other downstream 1245446 43270717 ~ 43272516 (-)
G145010 NA other downstream 1810683 42706818 ~ 42707279 (-)
G147800 NA other upstream 344296 44863085 ~ 44863559 (-)
tmem86a tmem86a other upstream 2325391 46844180 ~ 46921608 (-)
G150290 NA other upstream 2327363 46846152 ~ 46849616 (-)

Expression


Co-expression Network