G147506


Basic Information

Item Value
gene id G147506
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 44865186 ~ 44865585 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU169206
tttcttaatgggtgcatgcttattagtaactggaataagcaatttcataaatgtgtcaagtgcagcataTGTTTGCTCCTTATTGTACACTACGGACCAACatatattctttacatcaacaacataggaatcactacaaaacttattgtatgacctcttatacactatattaggcccagcctttggaacatTGGTTTACCTAGATATGGATACTATATTGTGATCTCTACATCTGATGGATCTGGGTACTGATTTcaagcaaatttctgcagcattagtaaagttGTGATCAATACATGCTGATGaattcattcctgtgctgtttgtaactatcctggttggttgactgataacctgaaccaggttgcaagCACTGGTTACAGTTCAAAGCTTTTCTTGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106912007

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169206 True 400 lncRNA 0.37 1 44865186 44865585

Neighbor

gene id symbol gene type direction distance location
LOC110490437 LOC106584212 coding upstream 311207 44551163 ~ 44553979 (+)
LOC110490388 LOC106604983 coding upstream 392262 44464974 ~ 44472924 (+)
LOC110490326 LOC106605007 coding upstream 904194 43955049 ~ 43960992 (+)
LOC110490316 LOC106584327 coding upstream 914839 43947088 ~ 43950347 (+)
LOC110490231 LOC106605011 coding upstream 1213434 43630465 ~ 43651752 (+)
LOC110490546 LOC106560730 coding downstream 337724 45203309 ~ 45255843 (+)
tsg101a tsg101 coding downstream 578488 45444073 ~ 45468845 (+)
brsk2a LOC106560719 coding downstream 730418 45596003 ~ 46132114 (+)
LOC118940395 NA coding downstream 833612 45699197 ~ 45755983 (+)
spty2d1 spty2d1 coding downstream 2100551 46966136 ~ 46980755 (+)
G147505 NA non-coding upstream 574 44864220 ~ 44864612 (+)
G147394 NA non-coding upstream 126713 44731784 ~ 44738473 (+)
G147369 NA non-coding upstream 189222 44673006 ~ 44675964 (+)
G147368 NA non-coding upstream 192628 44672298 ~ 44672558 (+)
G147364 NA non-coding upstream 193064 44662795 ~ 44672122 (+)
G147543 NA non-coding downstream 54833 44920418 ~ 44926833 (+)
G147544 NA non-coding downstream 55805 44921390 ~ 44927741 (+)
G147545 NA non-coding downstream 58193 44923778 ~ 44930276 (+)
G147654 NA non-coding downstream 207261 45072846 ~ 45143168 (+)
G148016 NA non-coding downstream 309261 45174846 ~ 45175067 (+)
G146841 NA other upstream 435793 44429153 ~ 44429393 (+)
G146226 NA other upstream 868121 43996780 ~ 43997065 (+)
G146165 NA other upstream 975577 43886596 ~ 43889609 (+)
G146114 NA other upstream 1065333 43799404 ~ 43799853 (+)
G146091 NA other upstream 1096024 43768707 ~ 43769162 (+)
G147510 NA other downstream 5215 44870800 ~ 44871500 (+)
G148191 NA other downstream 606497 45472082 ~ 45492379 (+)
uevld uevld other downstream 2116134 46981686 ~ 47007672 (+)
G150997 NA other downstream 2632363 47497948 ~ 47547579 (+)
G152167 NA other downstream 3691197 48556782 ~ 48557686 (+)

Expression


Co-expression Network