G147545


Basic Information

Item Value
gene id G147545
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 44923778 ~ 44930276 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU169246
AAGGAAAACAAGCCCTCAGCACAGACAAAAGCAGTCTTGTCCTTGCTTTCCTGGTCCATCTCAACTTGCCAATAACCACTATTGAGGTCAAGGGTAGTGAACACAACAGCGCCAGACAATGACTCCAGGATCTCGTGGATGGTAGGAAAAGGATAGGCATCAGTCTGGGAAACATTGTTGGTCTTCCTATAGTCCACACAAAATCTAAGACCACCAGTCTTTTTTGGGATGaggacaacaggagcagcccaaggaGAGGAGGAACGTTCTATTATATCTTGTGTTAACATATCATTAATGAGTCCCTTTTGGATGATTAGCTTCGCTGGGGACAAACGATATGGCTTTTGCTTGATCGGCATTTCCT

Function

NR:

description
PREDICTED: uncharacterized protein LOC109094915

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169246 True 367 lncRNA 0.45 2 44923778 44930276

Neighbor

gene id symbol gene type direction distance location
LOC110490437 LOC106584212 coding upstream 369799 44551163 ~ 44553979 (+)
LOC110490388 LOC106604983 coding upstream 450854 44464974 ~ 44472924 (+)
LOC110490326 LOC106605007 coding upstream 962786 43955049 ~ 43960992 (+)
LOC110490316 LOC106584327 coding upstream 973431 43947088 ~ 43950347 (+)
LOC110490231 LOC106605011 coding upstream 1272026 43630465 ~ 43651752 (+)
LOC110490546 LOC106560730 coding downstream 273033 45203309 ~ 45255843 (+)
tsg101a tsg101 coding downstream 513797 45444073 ~ 45468845 (+)
brsk2a LOC106560719 coding downstream 665727 45596003 ~ 46132114 (+)
LOC118940395 NA coding downstream 768921 45699197 ~ 45755983 (+)
spty2d1 spty2d1 coding downstream 2035860 46966136 ~ 46980755 (+)
G147506 NA non-coding upstream 58193 44865186 ~ 44865585 (+)
G147505 NA non-coding upstream 59166 44864220 ~ 44864612 (+)
G147394 NA non-coding upstream 185305 44731784 ~ 44738473 (+)
G147369 NA non-coding upstream 247814 44673006 ~ 44675964 (+)
G147368 NA non-coding upstream 251220 44672298 ~ 44672558 (+)
G147654 NA non-coding downstream 142570 45072846 ~ 45143168 (+)
G148016 NA non-coding downstream 244570 45174846 ~ 45175067 (+)
G148018 NA non-coding downstream 246923 45177199 ~ 45177497 (+)
G148029 NA non-coding downstream 258881 45189157 ~ 45189363 (+)
G148030 NA non-coding downstream 259497 45189773 ~ 45190090 (+)
G147510 NA other upstream 52278 44870800 ~ 44871500 (+)
G146841 NA other upstream 494385 44429153 ~ 44429393 (+)
G146226 NA other upstream 926713 43996780 ~ 43997065 (+)
G146165 NA other upstream 1034169 43886596 ~ 43889609 (+)
G146114 NA other upstream 1123925 43799404 ~ 43799853 (+)
G148191 NA other downstream 541806 45472082 ~ 45492379 (+)
uevld uevld other downstream 2051443 46981686 ~ 47007672 (+)
G150997 NA other downstream 2567672 47497948 ~ 47547579 (+)
G152167 NA other downstream 3626506 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 5168140 50098387 ~ 50100624 (+)

Expression


Co-expression Network