G148016


Basic Information

Item Value
gene id G148016
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 45174846 ~ 45175067 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU169757
ctaatgtacttgcctcccactcctctttctagagtctgcaataccactaagcaaggggaaccaccaagcaagcactatgaagaccaatgatctctccaaacaggtcagggacaaagttgtggagaagtacagatcagggttgggttataaaaaaatatctgaaactttgaacatcccatggagcaccattaaatccattattaaaaatggaaagaatatggc

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169757 True 222 lncRNA 0.41 1 45174846 45175067

Neighbor

gene id symbol gene type direction distance location
LOC110490437 LOC106584212 coding upstream 620867 44551163 ~ 44553979 (+)
LOC110490388 LOC106604983 coding upstream 701922 44464974 ~ 44472924 (+)
LOC110490326 LOC106605007 coding upstream 1213854 43955049 ~ 43960992 (+)
LOC110490316 LOC106584327 coding upstream 1224499 43947088 ~ 43950347 (+)
LOC110490231 LOC106605011 coding upstream 1523094 43630465 ~ 43651752 (+)
LOC110490546 LOC106560730 coding downstream 28242 45203309 ~ 45255843 (+)
tsg101a tsg101 coding downstream 269006 45444073 ~ 45468845 (+)
brsk2a LOC106560719 coding downstream 420936 45596003 ~ 46132114 (+)
LOC118940395 NA coding downstream 524130 45699197 ~ 45755983 (+)
spty2d1 spty2d1 coding downstream 1791069 46966136 ~ 46980755 (+)
G147654 NA non-coding upstream 31678 45072846 ~ 45143168 (+)
G147545 NA non-coding upstream 244570 44923778 ~ 44930276 (+)
G147544 NA non-coding upstream 247105 44921390 ~ 44927741 (+)
G147543 NA non-coding upstream 248013 44920418 ~ 44926833 (+)
G147506 NA non-coding upstream 309261 44865186 ~ 44865585 (+)
G148018 NA non-coding downstream 2132 45177199 ~ 45177497 (+)
G148029 NA non-coding downstream 14090 45189157 ~ 45189363 (+)
G148030 NA non-coding downstream 14706 45189773 ~ 45190090 (+)
G148127 NA non-coding downstream 103585 45278652 ~ 45279223 (+)
G148129 NA non-coding downstream 107335 45282402 ~ 45282662 (+)
G147510 NA other upstream 303346 44870800 ~ 44871500 (+)
G146841 NA other upstream 745453 44429153 ~ 44429393 (+)
G146226 NA other upstream 1177781 43996780 ~ 43997065 (+)
G146165 NA other upstream 1285237 43886596 ~ 43889609 (+)
G146114 NA other upstream 1374993 43799404 ~ 43799853 (+)
G148191 NA other downstream 297015 45472082 ~ 45492379 (+)
uevld uevld other downstream 1806652 46981686 ~ 47007672 (+)
G150997 NA other downstream 2322881 47497948 ~ 47547579 (+)
G152167 NA other downstream 3381715 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 4923349 50098387 ~ 50100624 (+)

Expression


Co-expression Network