G148029


Basic Information

Item Value
gene id G148029
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 45189157 ~ 45189363 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU169770
ctcatttagaaggctaacatttactcattcattttatccaACATCTAGATGTAAATCTGATAATTGAAAAGTGTACACGAACAGAGATACAGcaatgtgtgtttcctgtctttcatgagatcaccaaatgaaacaactTTGGCAGGATTGTTCTTTAAATACCCACGGActattcccacattctcaaaaatagaAACATTGTTTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169770 True 207 lncRNA 0.54 1 45189157 45189363

Neighbor

gene id symbol gene type direction distance location
LOC110490437 LOC106584212 coding upstream 635178 44551163 ~ 44553979 (+)
LOC110490388 LOC106604983 coding upstream 716233 44464974 ~ 44472924 (+)
LOC110490326 LOC106605007 coding upstream 1228165 43955049 ~ 43960992 (+)
LOC110490316 LOC106584327 coding upstream 1238810 43947088 ~ 43950347 (+)
LOC110490231 LOC106605011 coding upstream 1537405 43630465 ~ 43651752 (+)
LOC110490546 LOC106560730 coding downstream 13946 45203309 ~ 45255843 (+)
tsg101a tsg101 coding downstream 254710 45444073 ~ 45468845 (+)
brsk2a LOC106560719 coding downstream 406640 45596003 ~ 46132114 (+)
LOC118940395 NA coding downstream 509834 45699197 ~ 45755983 (+)
spty2d1 spty2d1 coding downstream 1776773 46966136 ~ 46980755 (+)
G148018 NA non-coding upstream 11660 45177199 ~ 45177497 (+)
G148016 NA non-coding upstream 14090 45174846 ~ 45175067 (+)
G147654 NA non-coding upstream 45989 45072846 ~ 45143168 (+)
G147545 NA non-coding upstream 258881 44923778 ~ 44930276 (+)
G147544 NA non-coding upstream 261416 44921390 ~ 44927741 (+)
G148030 NA non-coding downstream 410 45189773 ~ 45190090 (+)
G148127 NA non-coding downstream 89289 45278652 ~ 45279223 (+)
G148129 NA non-coding downstream 93039 45282402 ~ 45282662 (+)
G148134 NA non-coding downstream 100550 45289913 ~ 45290152 (+)
G148252 NA non-coding downstream 321576 45510939 ~ 45512458 (+)
G147510 NA other upstream 317657 44870800 ~ 44871500 (+)
G146841 NA other upstream 759764 44429153 ~ 44429393 (+)
G146226 NA other upstream 1192092 43996780 ~ 43997065 (+)
G146165 NA other upstream 1299548 43886596 ~ 43889609 (+)
G146114 NA other upstream 1389304 43799404 ~ 43799853 (+)
G148191 NA other downstream 282719 45472082 ~ 45492379 (+)
uevld uevld other downstream 1792356 46981686 ~ 47007672 (+)
G150997 NA other downstream 2308585 47497948 ~ 47547579 (+)
G152167 NA other downstream 3367419 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 4909053 50098387 ~ 50100624 (+)

Expression


Co-expression Network