G148191


Basic Information

Item Value
gene id G148191
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 45472082 ~ 45492379 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU169947
GCGATGTGTGTTTTATAAGACTCACCCATCGACCACCATCTTGTGGAGATGCTTCCAGTCCTCCTTGTCTGCGTCTGTGCCCATGTGTGGGTTTAGGCCTTTCAGGGAAACACCAGCAACATTCACGCCACTCCATACGGGCACTGGGATCTCCGTGCTCTCCAATGATCCAGCCGTGGCAACTGGAGGGGTGAAGGTGCAGCTTCTCGCCCATAAGGTGGCGGAAACGACCGGAGTCCAGGTTGGTGCCGGAACCGATGACGCGGTGACGGGGGAAACCGCTCAGCTTCCAGGCCACGTAGGTCAGGATGTCAACTGggatagacagaggagagaaaggagaaagggggGGTTACAAATGTTATCACAATTTGAGATAAGAAAACAAACCCTAACCATAccccttaaat
>TU169948
TATGGAGTGAGCAGGCCAGCACTAACATCTAATTCAAACCTGTCAATGACTTCGCACAATTCTAGAGTAATGATCAAGTCACTAGATCATGTTCAACCAAattactccctccctcccggcCTCCTCTTGTACCGGGGTTGGAGACGACCAGCAGGATAGCGTTGGGGCTGTACTTGACGATCTGGGGGATGATGAACTTGAAGATGTTGACGTTACGCTGCACCAGGTTCAGACGACTCTCGCCCTCCTGCTGACGAGCACCGGCGGTGACCACCACCACCTTGGAATGGGCGGTTGTACTGTAGTCTTATCGCCCACGATCTTGTGGGTCTTGCAGAAGAGGCTGCCATGCTGCAGGTCCATGACCTCACCCTTCAGCTTTTCCTCCATCACATCAATCAGGCACAGCTCATCGCACAGGTCCTGAGCAGGACGCTGACTGCGGAGGCCATGCCAACCATGCCGACGCCAACCACTGTCACCTTGCTTCGGGAGCCAACGGGCTCACCAGCCAACACATGGGTGATCAGCTTCTCCTTAGTGGTCATCtgagagacCTTGTAAGGTTTCGTGAAAGTGACGTGGAAACAACACTGAAATGCGAGTTGGAATGTCTTTGGCTGGCCTCTTCCCTGGCTGGATGCAGCTTTTCTATGGCActggtgtgtgtgagggaggttCCCGGTATTTAAGCAGCAGAGCGGTGCACGGTAAACGCTGCGTGATTACATGACACACTGGGAGGGTCCCGGGTGTCTCGTGTTAAATGTCATGTCCATGCAGAGCGAATGTGCTATGGGATGGAGAAGCCACTCACTGTGGCACAAGGAACGGGGTGGGGTCAGCTGTGGGCAGGCTCACCAACGACTAGCACAAAGCTCAGACACCAATGCATACCGTACATGCCACTaagggtctcttcacagtccccaagttcaGAACGGACTCTGAAAAACGCACAGTAGTACACAgcgacatgactacatggaactctattccacatcaagtaactcatgcaagcagtaaattcggatatttttttgttgtaaaacTACACCTTATAGAACAATGTAAAGCATATACTGGAAAAAATGCAGCAGCTAATAGGGACtcttaataaaaataaaacaatttttaGGCACTAACTCCGCCATTCTTAGTTGGACAAAGCCTATGTGGAAATGAATTATGTTTTTGGATTAACAcagaccacacaactactgaccacaaccatacAATTAGGTAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169947 False 410 TUCP 0.53 2 45472082 45472629
TU169948 True 1246 TUCP 0.50 4 45472745 45492379

Neighbor

gene id symbol gene type direction distance location
tsg101a tsg101 coding upstream 3237 45444073 ~ 45468845 (+)
LOC110490546 LOC106560730 coding upstream 216239 45203309 ~ 45255843 (+)
LOC110490437 LOC106584212 coding upstream 918103 44551163 ~ 44553979 (+)
LOC110490388 LOC106604983 coding upstream 999158 44464974 ~ 44472924 (+)
LOC110490326 LOC106605007 coding upstream 1511090 43955049 ~ 43960992 (+)
brsk2a LOC106560719 coding downstream 103624 45596003 ~ 46132114 (+)
LOC118940395 NA coding downstream 206818 45699197 ~ 45755983 (+)
spty2d1 spty2d1 coding downstream 1473757 46966136 ~ 46980755 (+)
uevld uevld coding downstream 1489307 46981686 ~ 47007672 (+)
cpt1ab LOC100653436 coding downstream 1641836 47134215 ~ 47205441 (+)
G148134 NA non-coding upstream 181930 45289913 ~ 45290152 (+)
G148129 NA non-coding upstream 189420 45282402 ~ 45282662 (+)
G148127 NA non-coding upstream 192859 45278652 ~ 45279223 (+)
G148030 NA non-coding upstream 281992 45189773 ~ 45190090 (+)
G148029 NA non-coding upstream 282719 45189157 ~ 45189363 (+)
G148252 NA non-coding downstream 18560 45510939 ~ 45512458 (+)
G148254 NA non-coding downstream 22367 45514746 ~ 45519843 (+)
G148415 NA non-coding downstream 47251 45539630 ~ 45539986 (+)
G148584 NA non-coding downstream 257851 45750230 ~ 45801517 (+)
G148621 NA non-coding downstream 307542 45799921 ~ 45800947 (+)
G147510 NA other upstream 600582 44870800 ~ 44871500 (+)
G146841 NA other upstream 1042689 44429153 ~ 44429393 (+)
G146226 NA other upstream 1475017 43996780 ~ 43997065 (+)
G146165 NA other upstream 1582473 43886596 ~ 43889609 (+)
G146114 NA other upstream 1672229 43799404 ~ 43799853 (+)
G150997 NA other downstream 2005569 47497948 ~ 47547579 (+)
G152167 NA other downstream 3064403 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 4606037 50098387 ~ 50100624 (+)
G154859 NA other downstream 5673036 51165415 ~ 51167174 (+)

Expression


Co-expression Network