G148252


Basic Information

Item Value
gene id G148252
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 45510939 ~ 45512458 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU170015
ggtaccatcacgaatttgtcatgctcaaaattttttagatgtatttttttttgtttcttactttttcaaagtcactgtgcatttggaatatgttttaatgggcaggtaccatcacgaatttgtcatgctcaaaattttttagatgtatttttttttgtttccttactttttcaaagtcactgtgcatttggaatatgttttaatgggcaggtaccatcacgaatttgtttatcgaatttgtttatgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaatgggcaggtaccatcacgaatttgtcatgctcaaaattttttagatgtatttttttttgtttccttactttttcaaagtcactgtgcatttggaatatgttttaatgggcaggtaccatcacgaatttgtttatcgaatttgtttatgtttccttactt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170015 True 451 lncRNA 0.48 2 45510939 45512458

Neighbor

gene id symbol gene type direction distance location
tsg101a tsg101 coding upstream 42094 45444073 ~ 45468845 (+)
LOC110490546 LOC106560730 coding upstream 255096 45203309 ~ 45255843 (+)
LOC110490437 LOC106584212 coding upstream 956960 44551163 ~ 44553979 (+)
LOC110490388 LOC106604983 coding upstream 1038015 44464974 ~ 44472924 (+)
LOC110490326 LOC106605007 coding upstream 1549947 43955049 ~ 43960992 (+)
brsk2a LOC106560719 coding downstream 83545 45596003 ~ 46132114 (+)
LOC118940395 NA coding downstream 186739 45699197 ~ 45755983 (+)
spty2d1 spty2d1 coding downstream 1453678 46966136 ~ 46980755 (+)
uevld uevld coding downstream 1469228 46981686 ~ 47007672 (+)
cpt1ab LOC100653436 coding downstream 1621757 47134215 ~ 47205441 (+)
G148134 NA non-coding upstream 220787 45289913 ~ 45290152 (+)
G148129 NA non-coding upstream 228277 45282402 ~ 45282662 (+)
G148127 NA non-coding upstream 231716 45278652 ~ 45279223 (+)
G148030 NA non-coding upstream 320849 45189773 ~ 45190090 (+)
G148029 NA non-coding upstream 321576 45189157 ~ 45189363 (+)
G148254 NA non-coding downstream 2288 45514746 ~ 45519843 (+)
G148415 NA non-coding downstream 27172 45539630 ~ 45539986 (+)
G148584 NA non-coding downstream 237772 45750230 ~ 45801517 (+)
G148621 NA non-coding downstream 287463 45799921 ~ 45800947 (+)
G148959 LOC100136012 non-coding downstream 789924 46302382 ~ 46302597 (+)
G148191 NA other upstream 18560 45472082 ~ 45492379 (+)
G147510 NA other upstream 639439 44870800 ~ 44871500 (+)
G146841 NA other upstream 1081546 44429153 ~ 44429393 (+)
G146226 NA other upstream 1513874 43996780 ~ 43997065 (+)
G146165 NA other upstream 1621330 43886596 ~ 43889609 (+)
G150997 NA other downstream 1985490 47497948 ~ 47547579 (+)
G152167 NA other downstream 3044324 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 4585958 50098387 ~ 50100624 (+)
G154859 NA other downstream 5652957 51165415 ~ 51167174 (+)

Expression


Co-expression Network