G149016


Basic Information

Item Value
gene id G149016
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 46386000 ~ 46386199 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU170859
agtgtgtcaaatcggagggtctgttgtccgggcctctggcagtctctatgggggtgccacagggttcaattcttggaccgactctcttctctgtatacagcaattatgtcgctcttgctgctggtgagtctctgatccacctctacgcagacgacagcattctgtatacttctggcccttttttggacactgtgttaaca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170859 True 200 lncRNA 0.51 1 46386000 46386199

Neighbor

gene id symbol gene type direction distance location
brsk2a LOC106560719 coding upstream 253886 45596003 ~ 46132114 (+)
LOC118940395 NA coding upstream 630017 45699197 ~ 45755983 (+)
tsg101a tsg101 coding upstream 917155 45444073 ~ 45468845 (+)
LOC110490546 LOC106560730 coding upstream 1130157 45203309 ~ 45255843 (+)
LOC110490437 LOC106584212 coding upstream 1832021 44551163 ~ 44553979 (+)
spty2d1 spty2d1 coding downstream 579937 46966136 ~ 46980755 (+)
uevld uevld coding downstream 595487 46981686 ~ 47007672 (+)
cpt1ab LOC100653436 coding downstream 748016 47134215 ~ 47205441 (+)
igf2b igf2 coding downstream 981981 47368180 ~ 47373699 (+)
osbpl5 LOC106560704 coding downstream 1641210 48027409 ~ 48133974 (+)
G148968 NA non-coding upstream 48127 46322656 ~ 46337873 (+)
G148967 NA non-coding upstream 64390 46318050 ~ 46321610 (+)
G148959 LOC100136012 non-coding upstream 83403 46302382 ~ 46302597 (+)
G148584 NA non-coding upstream 584483 45750230 ~ 45801517 (+)
G148621 NA non-coding upstream 585053 45799921 ~ 45800947 (+)
G149021 NA non-coding downstream 6404 46392603 ~ 46392907 (+)
G149025 NA non-coding downstream 15393 46401592 ~ 46401968 (+)
G149027 NA non-coding downstream 17103 46403302 ~ 46403515 (+)
G149030 NA non-coding downstream 20281 46406480 ~ 46406706 (+)
G149035 NA non-coding downstream 24676 46410875 ~ 46411078 (+)
G148191 NA other upstream 893621 45472082 ~ 45492379 (+)
G147510 NA other upstream 1514500 44870800 ~ 44871500 (+)
G146841 NA other upstream 1956607 44429153 ~ 44429393 (+)
G146226 NA other upstream 2388935 43996780 ~ 43997065 (+)
G146165 NA other upstream 2496391 43886596 ~ 43889609 (+)
G150997 NA other downstream 1111749 47497948 ~ 47547579 (+)
G152167 NA other downstream 2170583 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 3712217 50098387 ~ 50100624 (+)
G154859 NA other downstream 4779216 51165415 ~ 51167174 (+)

Expression


Co-expression Network