G149831


Basic Information

Item Value
gene id G149831
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 46414468 ~ 46415094 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU171711
ATTTAGAAATGTATAAGAGTAGCATTGTCAGTTGTAAATAATGTAcatagccaagaaacacaagaacAAAATCTGGCTTTAGTAGACTTTCGAATAAATTAGACCAACATTTATGCCTGTGCGCAGCGCTTCTAAAAGTTAATGTTCAACACTTGAAACACAGTGCGCAGAGCTCCCCAGCCAGGCACTGTTGCTGCGCATTGCACAAGGTAggatatatattatagtattcGTAGTTCTTTGTATGATTAGCTACCAgctgtaaaacaaaacaaaataaacactTTGCTATTAATGTGGTCAATCTTGACTTGCTTTTGTTAGGGATATGTTGAGAATGACATGATGCAAATGCCATGGTATTTTCCTGCCATGGAAGAGTAGGACAATGAAAAAAATACCATGGTAGTATCATGTTTTTTTGGTCATTACCATGATATTTTCCTGCCACGGTAGTGACCAAAAAAACATCATAGTACCATGGTATTTTTTTCATTGTCCTACTGTTCCATGGCAGGAAAATACCATGTTATTTGCATCATGTCATTCTCAAAATATCCCTAACAAAAGCAAGTTACAATGAGTCCTCTATCGCCATGACTACGACAGGCTATGTAATAttcatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171711 True 627 lncRNA 0.36 1 46414468 46415094

Neighbor

gene id symbol gene type direction distance location
abtb2b abtb2 coding downstream 125125 46139256 ~ 46289343 (-)
ldha ldha coding downstream 922550 45469242 ~ 45491918 (-)
si:ch211-272n13.3 LOC106560721 coding downstream 1019500 45278394 ~ 45394968 (-)
LOC118936755 LOC106560723 coding downstream 1242612 45171198 ~ 45171856 (-)
LOC110490531 LOC106560723 coding downstream 1246208 45134476 ~ 45168260 (-)
LOC118940396 LOC106604981 coding upstream 174792 46589886 ~ 46592723 (-)
tmem86a tmem86a coding upstream 457201 46844180 ~ 46921608 (-)
si:dkeyp-19e1.3 LOC106560684 coding upstream 617915 47033009 ~ 47130517 (-)
si:ch211-236l14.4 LOC106560706 coding upstream 812272 47227366 ~ 47311705 (-)
mrpl23 LOC105008177 coding upstream 1449718 47864812 ~ 47998457 (-)
G149838 NA non-coding downstream 1186 46413081 ~ 46413282 (-)
G149837 NA non-coding downstream 2363 46411710 ~ 46412105 (-)
G149835 NA non-coding downstream 5059 46409137 ~ 46409409 (-)
G149828 NA non-coding downstream 14269 46399987 ~ 46400199 (-)
G149827 NA non-coding downstream 16167 46398092 ~ 46398301 (-)
G149844 NA non-coding upstream 4655 46419749 ~ 46419949 (-)
G149845 NA non-coding upstream 5128 46420222 ~ 46420426 (-)
G149847 NA non-coding upstream 5934 46421028 ~ 46421365 (-)
G149849 NA non-coding upstream 8330 46423424 ~ 46423725 (-)
G149850 NA non-coding upstream 9382 46424476 ~ 46476215 (-)
G147800 NA other downstream 1550909 44863085 ~ 44863559 (-)
LOC110490449 scmh1 other downstream 1835713 44571948 ~ 44606865 (-)
LOC110490352 NA other downstream 1978351 44434790 ~ 44464449 (-)
LOC110490298 LOC106605170 other downstream 2630749 43776063 ~ 43783884 (-)
G150290 NA other upstream 431058 46846152 ~ 46849616 (-)
G150618 NA other upstream 549640 46964734 ~ 46993665 (-)
G150675 LOC100653436 other upstream 779799 47194893 ~ 47205433 (-)
G151474 NA other upstream 1435691 47850785 ~ 47851348 (-)

Expression


Co-expression Network