G149949


Basic Information

Item Value
gene id G149949
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 46544960 ~ 46545422 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU171839
cgcttcggGTATGtcactatcagttttgcacatcgagagactgacatttttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttctgttctttccacagattctcaattggattcaggtctggactttgacttggctattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcagggtttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttaacagtggggatggtgtgttcagggtgatgagctgtgttg

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171839 True 463 lncRNA 0.39 1 46544960 46545422

Neighbor

gene id symbol gene type direction distance location
abtb2b abtb2 coding downstream 255617 46139256 ~ 46289343 (-)
ldha ldha coding downstream 1053042 45469242 ~ 45491918 (-)
si:ch211-272n13.3 LOC106560721 coding downstream 1149992 45278394 ~ 45394968 (-)
LOC118936755 LOC106560723 coding downstream 1373104 45171198 ~ 45171856 (-)
LOC110490531 LOC106560723 coding downstream 1376700 45134476 ~ 45168260 (-)
LOC118940396 LOC106604981 coding upstream 44464 46589886 ~ 46592723 (-)
tmem86a tmem86a coding upstream 326873 46844180 ~ 46921608 (-)
si:dkeyp-19e1.3 LOC106560684 coding upstream 487587 47033009 ~ 47130517 (-)
si:ch211-236l14.4 LOC106560706 coding upstream 681944 47227366 ~ 47311705 (-)
mrpl23 LOC105008177 coding upstream 1319390 47864812 ~ 47998457 (-)
G149941 NA non-coding downstream 12390 46532277 ~ 46532570 (-)
G149850 NA non-coding downstream 68745 46424476 ~ 46476215 (-)
G149891 NA non-coding downstream 78042 46465683 ~ 46466918 (-)
G149849 NA non-coding downstream 121235 46423424 ~ 46423725 (-)
G149847 NA non-coding downstream 123595 46421028 ~ 46421365 (-)
G149951 NA non-coding upstream 821 46546243 ~ 46546451 (-)
G149965 NA non-coding upstream 20298 46565720 ~ 46565929 (-)
G149966 NA non-coding upstream 22329 46567751 ~ 46567951 (-)
G149967 NA non-coding upstream 22939 46568361 ~ 46568580 (-)
G149969 NA non-coding upstream 24989 46570411 ~ 46570963 (-)
G147800 NA other downstream 1681401 44863085 ~ 44863559 (-)
LOC110490449 scmh1 other downstream 1966205 44571948 ~ 44606865 (-)
LOC110490352 NA other downstream 2108843 44434790 ~ 44464449 (-)
LOC110490298 LOC106605170 other downstream 2761241 43776063 ~ 43783884 (-)
G150290 NA other upstream 300730 46846152 ~ 46849616 (-)
G150618 NA other upstream 419312 46964734 ~ 46993665 (-)
G150675 LOC100653436 other upstream 649471 47194893 ~ 47205433 (-)
G151474 NA other upstream 1305363 47850785 ~ 47851348 (-)

Expression


Co-expression Network