Gene
RNA
| Item | Value |
|---|---|
| gene id | G149151 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 46563954 ~ 46564202 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU171000 | True | 249 | lncRNA | 0.49 | 1 | 46563954 | 46564202 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| brsk2a | LOC106560719 | coding | upstream | 431840 | 45596003 ~ 46132114 (+) |
| LOC118940395 | NA | coding | upstream | 807971 | 45699197 ~ 45755983 (+) |
| tsg101a | tsg101 | coding | upstream | 1095109 | 45444073 ~ 45468845 (+) |
| LOC110490546 | LOC106560730 | coding | upstream | 1308111 | 45203309 ~ 45255843 (+) |
| LOC110490437 | LOC106584212 | coding | upstream | 2009975 | 44551163 ~ 44553979 (+) |
| spty2d1 | spty2d1 | coding | downstream | 401934 | 46966136 ~ 46980755 (+) |
| uevld | uevld | coding | downstream | 417484 | 46981686 ~ 47007672 (+) |
| cpt1ab | LOC100653436 | coding | downstream | 570013 | 47134215 ~ 47205441 (+) |
| igf2b | igf2 | coding | downstream | 803978 | 47368180 ~ 47373699 (+) |
| osbpl5 | LOC106560704 | coding | downstream | 1463207 | 48027409 ~ 48133974 (+) |
| G149144 | NA | non-coding | upstream | 8693 | 46555023 ~ 46555261 (+) |
| G149098 | NA | non-coding | upstream | 65015 | 46491577 ~ 46498939 (+) |
| G149049 | NA | non-coding | upstream | 130587 | 46424221 ~ 46433367 (+) |
| G149046 | NA | non-coding | upstream | 142954 | 46420758 ~ 46421000 (+) |
| G149041 | NA | non-coding | upstream | 149812 | 46413871 ~ 46414142 (+) |
| G149154 | NA | non-coding | downstream | 4017 | 46568219 ~ 46568459 (+) |
| G149158 | NA | non-coding | downstream | 8150 | 46572352 ~ 46572611 (+) |
| G149167 | NA | non-coding | downstream | 18210 | 46582412 ~ 46634067 (+) |
| G150150 | NA | non-coding | downstream | 226786 | 46790988 ~ 46791374 (+) |
| G150186 | NA | non-coding | downstream | 247755 | 46811957 ~ 46812248 (+) |
| G148191 | NA | other | upstream | 1071575 | 45472082 ~ 45492379 (+) |
| G147510 | NA | other | upstream | 1692454 | 44870800 ~ 44871500 (+) |
| G146841 | NA | other | upstream | 2134561 | 44429153 ~ 44429393 (+) |
| G146226 | NA | other | upstream | 2566889 | 43996780 ~ 43997065 (+) |
| G146165 | NA | other | upstream | 2674345 | 43886596 ~ 43889609 (+) |
| G150997 | NA | other | downstream | 933746 | 47497948 ~ 47547579 (+) |
| G152167 | NA | other | downstream | 1992580 | 48556782 ~ 48557686 (+) |
| LOC110491026 | LOC106560691 | other | downstream | 3534214 | 50098387 ~ 50100624 (+) |
| G154859 | NA | other | downstream | 4601213 | 51165415 ~ 51167174 (+) |
