G149167


Basic Information

Item Value
gene id G149167
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 46582412 ~ 46634067 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU171019
actttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatcaatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttgtacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtcacccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatggctttcttcttgctactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcaactgtagatctctgtagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttcctcttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattattgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgtgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaactcctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgcgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtatttagccaTGGAACATGGTCCGATTGGCCAGGGAGGTGTCAAGCCTTGACACACCAACAACTTAtg

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171019 True 1263 lncRNA 0.42 2 46582412 46634067

Neighbor

gene id symbol gene type direction distance location
brsk2a LOC106560719 coding upstream 450298 45596003 ~ 46132114 (+)
LOC118940395 NA coding upstream 826429 45699197 ~ 45755983 (+)
tsg101a tsg101 coding upstream 1113567 45444073 ~ 45468845 (+)
LOC110490546 LOC106560730 coding upstream 1326569 45203309 ~ 45255843 (+)
LOC110490437 LOC106584212 coding upstream 2028433 44551163 ~ 44553979 (+)
spty2d1 spty2d1 coding downstream 332069 46966136 ~ 46980755 (+)
uevld uevld coding downstream 347619 46981686 ~ 47007672 (+)
cpt1ab LOC100653436 coding downstream 500148 47134215 ~ 47205441 (+)
igf2b igf2 coding downstream 734113 47368180 ~ 47373699 (+)
osbpl5 LOC106560704 coding downstream 1393342 48027409 ~ 48133974 (+)
G149158 NA non-coding upstream 9801 46572352 ~ 46572611 (+)
G149154 NA non-coding upstream 13953 46568219 ~ 46568459 (+)
G149151 NA non-coding upstream 18210 46563954 ~ 46564202 (+)
G149144 NA non-coding upstream 27151 46555023 ~ 46555261 (+)
G149098 NA non-coding upstream 83473 46491577 ~ 46498939 (+)
G150150 NA non-coding downstream 156921 46790988 ~ 46791374 (+)
G150186 NA non-coding downstream 177890 46811957 ~ 46812248 (+)
G150210 NA non-coding downstream 208237 46842304 ~ 46842593 (+)
G150211 NA non-coding downstream 208824 46842891 ~ 46843203 (+)
G150225 NA non-coding downstream 223827 46857894 ~ 46858222 (+)
G148191 NA other upstream 1090033 45472082 ~ 45492379 (+)
G147510 NA other upstream 1710912 44870800 ~ 44871500 (+)
G146841 NA other upstream 2153019 44429153 ~ 44429393 (+)
G146226 NA other upstream 2585347 43996780 ~ 43997065 (+)
G146165 NA other upstream 2692803 43886596 ~ 43889609 (+)
G150997 NA other downstream 863881 47497948 ~ 47547579 (+)
G152167 NA other downstream 1922715 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 3464349 50098387 ~ 50100624 (+)
G154859 NA other downstream 4531348 51165415 ~ 51167174 (+)

Expression


Co-expression Network