G150150


Basic Information

Item Value
gene id G150150
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 46790988 ~ 46791374 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU172058
TATTTGGTTTCAGATATATGCATACTGATAATCCCCAATTACATTTTTATATGAATTGAACGCATGTAGAGCAAGTGAAAACATTTTCAGAGTATGTAACATCAAGCACTCTGAATCAGGTgattcaatccctggtcctatcacacttagagtactgtccagatATATTGTCATCTGCAGCAAAGAAAGATAGAAAAAAGCTCTAAATCACTCAAACCAGGGCTGACAGATTAACTCTTCATTGCTCTCTTTATGAATATTGTCCAAATGCATCAGAATTTCTCGTGGCTTCAAAATGAAAAAGATTTACTGATCTGGTCttctgattttctttaggaatgttatatttaaaaaacacagtATTTTTCAGGCCAGTTAGTACATACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172058 True 387 lncRNA 0.34 1 46790988 46791374

Neighbor

gene id symbol gene type direction distance location
brsk2a LOC106560719 coding upstream 658874 45596003 ~ 46132114 (+)
LOC118940395 NA coding upstream 1035005 45699197 ~ 45755983 (+)
tsg101a tsg101 coding upstream 1322143 45444073 ~ 45468845 (+)
LOC110490546 LOC106560730 coding upstream 1535145 45203309 ~ 45255843 (+)
LOC110490437 LOC106584212 coding upstream 2237009 44551163 ~ 44553979 (+)
spty2d1 spty2d1 coding downstream 174762 46966136 ~ 46980755 (+)
uevld uevld coding downstream 190312 46981686 ~ 47007672 (+)
cpt1ab LOC100653436 coding downstream 342841 47134215 ~ 47205441 (+)
igf2b igf2 coding downstream 576806 47368180 ~ 47373699 (+)
osbpl5 LOC106560704 coding downstream 1236035 48027409 ~ 48133974 (+)
G149167 NA non-coding upstream 156921 46582412 ~ 46634067 (+)
G149158 NA non-coding upstream 218377 46572352 ~ 46572611 (+)
G149154 NA non-coding upstream 222529 46568219 ~ 46568459 (+)
G149151 NA non-coding upstream 226786 46563954 ~ 46564202 (+)
G149144 NA non-coding upstream 235727 46555023 ~ 46555261 (+)
G150186 NA non-coding downstream 20583 46811957 ~ 46812248 (+)
G150210 NA non-coding downstream 50930 46842304 ~ 46842593 (+)
G150211 NA non-coding downstream 51517 46842891 ~ 46843203 (+)
G150225 NA non-coding downstream 66520 46857894 ~ 46858222 (+)
G150227 tmem86a non-coding downstream 80921 46872295 ~ 46877077 (+)
G148191 NA other upstream 1298609 45472082 ~ 45492379 (+)
G147510 NA other upstream 1919488 44870800 ~ 44871500 (+)
G146841 NA other upstream 2361595 44429153 ~ 44429393 (+)
G146226 NA other upstream 2793923 43996780 ~ 43997065 (+)
G146165 NA other upstream 2901379 43886596 ~ 43889609 (+)
G150997 NA other downstream 706574 47497948 ~ 47547579 (+)
G152167 NA other downstream 1765408 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 3307042 50098387 ~ 50100624 (+)
G154859 NA other downstream 4374041 51165415 ~ 51167174 (+)

Expression


Co-expression Network