G150227 (tmem86a)


Basic Information

Item Value
gene id G150227
gene name tmem86a
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 46872295 ~ 46877077 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU172136
GTTCGTTTAAgcttttatttaaaaatgtacaACTGTAACAGTACAAAATTGCATTTTAAACAAATAGGAGAATGGTTTAATTAAAGTTTGACTTTTGTTGCATTAAGGGGAGCTCATGCTTCCCCTCATTTCAAATCTTGATCTATCAGTGATCCCTTCTGCAGCTTAGACTGTCATTttatttaggttaaaagttggttgacaaaaaaaatccaaaattCCTGTACGTTGATGagtttttgcaaatccaattaaTCTTCtacattgattcaacatcatcaaaagAAAAAACATTGCAGTTTTTTTAACGTTctcggaacaatttgagaacatgactttaaatggAACCaggaggaaacctgtaggaaaatGTTATgcctgaagtactgaaattcccaacgaagaacgttgtttcttaacgaagttgaatttttttttaacattcccaatgtcaaaccagttggagaacattcctagaacatgaccaaaattgaaatgaaatgtaaccatgtttgaacttttaggaaacattctgttaaagtaatgaagtACCTTGAAGTTCCTTAAaagtgctgagaatgttccaaactatcctgcaccattcccagaaagttgtggaaaagttgtatgcaaaataaacATAGGACAATTActctctcaccaagctctaagaaacatatggttctcagaacattatgtgctagttGGGAAAACGTTACCTAAAAATGGCCTGGCATTAATCAAAGGATTTTGAGAAAATATTACAAAATAGGAATACGCCGGTATGATGTACATTTAGCCAATGTTCAAGCAAAATGATAGTTCACAGCAATTCTGCCACGGCCCTAGAGGGAGCTCGACACACacctacacgcacgcacacacaaataacATGCAACAATGTATCTGTTTTCTAAAATGTCTTAAATACACACTGACATTTTTTCAGTCAATATGCTTCAAACAGACAGCACAATAACTCAGCAAAGATGTCCCTATAGCTGGTGCAACAGATACTATGACAGATAAGTGTCATAGCTGCATATCTATTTAGGGGGATATAACCAATTGGGATTGAGTGGTATAATTGTTCCCTTGTGCTAATGAAACCATTGgccagtcttctctctcttttttggcTGTGTTTGGACCCTAAGGGACCAGGGTGTCCTAGGGCTGTGTTCTTCTCTGAAGGCCCAAGCACTGCAGACAAAACAAGGACTGGCTTCAGCCAACATGTCCTTTTCGTAACACTTTATATGGCCACAGGCACACAGTTGgtagctgaaaatgttccagcaATAAGGGCACCACCAGCCTTCTTCTAATAACCAAACCAGCAGGAGCTGGGGGTATGAAGTGTGACCTGAAGGAAGCgtgtatatgtggtgtgtgtttgtgcgtgttcaGGGTAACATAAACAGTAAAGAAGGAACACTGTGAGATGCCTCAGGTACagagcgtacacacacacacacacacacacacacacacacacagatctaagAAAAATGTTCCCCTTAGGGACCAGCCTTTTGAGTGATCAGTATGACTGTGGTAAAATACTAGAGCAGGCGCTCTCAAATGATCTCTCTCacatgctgaccaaaccggcCACGTTGCGTGCGCAAGTGTTGAGAGAAATAAATGtagacatacatgttattcaataattTCATCGAAACTGCTCACGCACGTCATCTGCATAGCCAggcactaaaatagaacttggttttATTTGGCGCGGCAAGTCATGCCTCTCCCATCTCCGCCTTGGTTTTTAGGATCATACAAACCCACGtgagtgattgaaagatgaagCAGGTCCACACTCCAGCCTAGTTGATGGAGGTCATGAGCCTTAATGCCGGTTGTCAACAGTCATATAAAATCCAAAGAGGAATGAATGAGGAGAGATGAATCAAAGAAAACATACTAGGTTTTCCCTTTTACCTTTTGATTCATTGTCGGAGTAGAGAACACACGATTTTGTGGGACTCAAAATGggtacaaaattctacaaagatccagCAGATAGAAGGACCATATGGATTTCAGTTACAATAGCAACCCAATGttcatatcccaggacaaatgatTTAGCAACAGCTAGCTAGGTAAAAGTCcacaaattctctctctctctgtgtgtgtgcgtagacATTCACAGCAATTTTCATAGGCTCATagacacaggagagaggatgtattctAATAGGAGTGTGGCGAGCAGAAGTACAAAAGGCAGTTTGTCTTAAGTGAAAGTGAAGAGACTAAAATCAGTAAAAAAAAGGAGGGTGGATGTGCTCCAGACTTTGAGAACAGCACCTAAATACATGAGAAGAGACAGCAGTTATGGGACACAACCTCCCCCATAACAAGTCGAGATGTGCAAACTTATTCACTATAACAACTCCCTTTTCAGAGATAAATTAAATAATGGTGATAAAATAGTTGCAAAGACAATATGCCACAGGAAACACATCCATTTGAATTTGCAATATTGGACCACATTATACTGTAAATGGGGTGGAGAGGGCAGCCAATGACTGGGGGGCAGAAGGAAGATGTGCTATTATTGTAGCAGGCCATGAGAAATCACACTCATCTGTAGGTTATATAGTATGAATCCTCTAACCTAatacgcacgcgcacgcacacgcacccacacccacacacaaacctTGACATGGTGATCTGTATGGTCATCTGTACCAACATCCTAGGCAGTGAGGTGGGGGAGTTGTCGTGCACTACTCTCTAGTAACTAGGACGTATCTACGAGAACTGTAGGGCAGTAGTTGagggttaaaagtagtgcacttgtcTCCATGGTAACTAGGGTCTTTGACTGTCCCACTAGCCATGGGGCAGGCTGGTGGTAGTACACTAGTTTCCATGGTAACAAGGGTGTGCGAATGCCACGCTACAACCAAAGTAGGGGGTTTGGGGGTAACTGTCTCTGGAATATGTCCATGACAAAAACAAGGGGGATTGGCTGCCCCTATCACATCTTCTTGATCACGTGACGcgacctcgctctctcctcttcatGCCATCTTCCTTGCCGTCTCCACATCCTGGCACTCGACGGCGGAGAGCGCGATCAGCATCTGCGCGGCGTAGTAGGTGGCCATGATAACGGCGCGTGAGTGCGGCACAGGGAAGCAGAACTTGTTAACGGCAATAGTGAGGTCGGAGACCATGAAGAGTACAGCGCCCAGACATGCCGACATCTTGGTCCAGGTCCACAGGTCATTGGCCAACTGGAGGCCGGCCACAGCCCGCCAGCCCATGAAGCCGATCAGGGCGATATAGACCCCCACCAGGTAGGTGAAGGGGCCTGAGAGGTAGGGGTAGAGCAGGGCGTAGCTCACGGCCGAAATGGCGCCAATCACCAGGCCGGCAAGCGGGTTCAGGGGCTTCATACCGAAGGCCGAGGAGTAGAGGATGTGGGA

Function

symbol description
tmem86a Predicted to enable alkenylglycerophosphocholine hydrolase activity and alkenylglycerophosphoethanolamine hydrolase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in central nervous system; otic vesicle; and sensory system. Orthologous to human TMEM86A (transmembrane protein 86A).

NR:

description
lysoplasmalogenase-like protein TMEM86A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172136 True 3458 lncRNA 0.40 2 46872295 46877077

Neighbor

gene id symbol gene type direction distance location
brsk2a LOC106560719 coding upstream 740181 45596003 ~ 46132114 (+)
LOC118940395 NA coding upstream 1116312 45699197 ~ 45755983 (+)
tsg101a tsg101 coding upstream 1403450 45444073 ~ 45468845 (+)
LOC110490546 LOC106560730 coding upstream 1616452 45203309 ~ 45255843 (+)
LOC110490437 LOC106584212 coding upstream 2318316 44551163 ~ 44553979 (+)
spty2d1 spty2d1 coding downstream 89059 46966136 ~ 46980755 (+)
uevld uevld coding downstream 104609 46981686 ~ 47007672 (+)
cpt1ab LOC100653436 coding downstream 257138 47134215 ~ 47205441 (+)
igf2b igf2 coding downstream 491103 47368180 ~ 47373699 (+)
osbpl5 LOC106560704 coding downstream 1150332 48027409 ~ 48133974 (+)
G150225 NA non-coding upstream 14073 46857894 ~ 46858222 (+)
G150211 NA non-coding upstream 29092 46842891 ~ 46843203 (+)
G150210 NA non-coding upstream 29702 46842304 ~ 46842593 (+)
G150186 NA non-coding upstream 60047 46811957 ~ 46812248 (+)
G150150 NA non-coding upstream 80921 46790988 ~ 46791374 (+)
G150313 NA non-coding downstream 54024 46931101 ~ 46931324 (+)
G150317 NA non-coding downstream 64104 46941181 ~ 46941449 (+)
G150319 NA non-coding downstream 65779 46942856 ~ 46943090 (+)
G150324 NA non-coding downstream 76535 46953612 ~ 46953847 (+)
G150339 NA non-coding downstream 129262 47006339 ~ 47006712 (+)
G148191 NA other upstream 1379916 45472082 ~ 45492379 (+)
G147510 NA other upstream 2000795 44870800 ~ 44871500 (+)
G146841 NA other upstream 2442902 44429153 ~ 44429393 (+)
G146226 NA other upstream 2875230 43996780 ~ 43997065 (+)
G146165 NA other upstream 2982686 43886596 ~ 43889609 (+)
G150997 NA other downstream 620871 47497948 ~ 47547579 (+)
G152167 NA other downstream 1679705 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 3221339 50098387 ~ 50100624 (+)
G154859 NA other downstream 4288338 51165415 ~ 51167174 (+)

Expression


Co-expression Network