G150317


Basic Information

Item Value
gene id G150317
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 46941181 ~ 46941449 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU172231
cctccagagttcctctgtggaggacaaccatttctgcagcactccgccaatcaggcctttattatgggagagtggtcagacggaagctactcctaAGAAAAGGGCACtggacagcctgcttggagtttgccaaaaggcacctaaatgaatcttagaccatgagaaacaagattctctggtctgatgaaaccaagattgaactctttggcttgaatgtgaagcgtcacgtttggaggaaacctggcaccgtccctacggtgaagcatggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172231 True 269 lncRNA 0.36 1 46941181 46941449

Neighbor

gene id symbol gene type direction distance location
brsk2a LOC106560719 coding upstream 809067 45596003 ~ 46132114 (+)
LOC118940395 NA coding upstream 1185198 45699197 ~ 45755983 (+)
tsg101a tsg101 coding upstream 1472336 45444073 ~ 45468845 (+)
LOC110490546 LOC106560730 coding upstream 1685338 45203309 ~ 45255843 (+)
LOC110490437 LOC106584212 coding upstream 2387202 44551163 ~ 44553979 (+)
spty2d1 spty2d1 coding downstream 24687 46966136 ~ 46980755 (+)
uevld uevld coding downstream 40237 46981686 ~ 47007672 (+)
cpt1ab LOC100653436 coding downstream 192766 47134215 ~ 47205441 (+)
igf2b igf2 coding downstream 426731 47368180 ~ 47373699 (+)
osbpl5 LOC106560704 coding downstream 1085960 48027409 ~ 48133974 (+)
G150313 NA non-coding upstream 9857 46931101 ~ 46931324 (+)
G150227 tmem86a non-coding upstream 64104 46872295 ~ 46877077 (+)
G150225 NA non-coding upstream 82959 46857894 ~ 46858222 (+)
G150211 NA non-coding upstream 97978 46842891 ~ 46843203 (+)
G150210 NA non-coding upstream 98588 46842304 ~ 46842593 (+)
G150319 NA non-coding downstream 1407 46942856 ~ 46943090 (+)
G150324 NA non-coding downstream 12163 46953612 ~ 46953847 (+)
G150339 NA non-coding downstream 64890 47006339 ~ 47006712 (+)
G150467 NA non-coding downstream 272649 47214098 ~ 47220529 (+)
G150478 NA non-coding downstream 285936 47227385 ~ 47230109 (+)
G148191 NA other upstream 1448802 45472082 ~ 45492379 (+)
G147510 NA other upstream 2069681 44870800 ~ 44871500 (+)
G146841 NA other upstream 2511788 44429153 ~ 44429393 (+)
G146226 NA other upstream 2944116 43996780 ~ 43997065 (+)
G146165 NA other upstream 3051572 43886596 ~ 43889609 (+)
G150997 NA other downstream 556499 47497948 ~ 47547579 (+)
G152167 NA other downstream 1615333 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 3156967 50098387 ~ 50100624 (+)
G154859 NA other downstream 4223966 51165415 ~ 51167174 (+)

Expression


Co-expression Network