G150675 (LOC100653436)


Basic Information

Item Value
gene id G150675
gene name LOC100653436
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 47194893 ~ 47205433 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU172611
GTTGACATTCGCTTTTATTGGGTTAAAAAGTTTTGGTATTTCAGCTGCTTGTCTTTTTGCACATATCTTTAAATTAGCTAGCTTCTTCATCCAAACCAGGCAGACGTGTAAACGGGTCTACTGTGAGAAGTTGTATTACAACTACAATAGATTGTTTTCCATGTATGCAATAACAAAGTCAGGAATAACAAAggcatgtcaaaaatgttttttaatcaTAAAATAAAATTTCCTTTTCAATACCTAAATAAGCAAAGAATTGATATTGGTTACAAGTTAGCCTACTACATTTTTTAAAGTCTTTCCTATGTAGTATAGTCCTATACACCATTGTCTAATCCTATGTATCCTGCATCTGTGTACTGCCCCAATAGTTTCCAAATATGTTCACATTCAACACACTGCAAGTCTCTTGAGACACTGTGTTCATGTTGGTGAAATACGACAGTCTCTTCACTTGAAAAAATTATCTACAACAAACAGAACTACAACACAGTTGGTTGACATTCTTATGATATACATCATGACAGTTCACCCCTGGATGAAAAGTCCCTTTATAAGCAGATATAGTCAGATCGTCTGTGGTCTGagacctgggtcgtgttcattataCACAAAACTGAAGAAAAAAACAGTCCAACAAGAAATGCTTGTTTTCgctttctgttgcaaaatgttttgctacggtgtgccctaatgaaaaCAACCATGGGTAAAGGCTACAAAGGCAGTTAGGCTAGTGTGATCTGAAGGGCCAGTCCTGTAGAGCGCTGACAAACAAAAAGTGCAGTGACCACCCCTAACCCATCAACAGCTGCAATGAGAGGATTCAGAATTGAACATGCAACGCAGGGCCATGTTCAGTAGGCAAACATTTAGGAATGTCATGATTTGAAGTGATTCCTCTTTTTACATGttagagaggcatgtttgttctacgtTCCACAACATTGTGCCATGCTGAACTTGGCCCAGGCGAGATTACTCCCAAACGATACCATATCTTCCTTCTACTGAAACACAAATATCCATGTTTACTTCGAACGACTATCTGCTGTGAAGCGTAATATTCTGTATTCTAAATTGCTTTTTTACCCCTAGACAATCATTATGGTAATTACGCCATCTAGCCCTTGGAGAGGCTAAGTGGAATTTTCACCATACACTTAAATATTTTCAGATCTACAGAAGATAGAAGTTAGAGGCTAGAGTTCCATTTGGAATTCAGCAGTAGTAGTGTATCCCGAAACCTTACTGTACACGCCAAACCTGTAATGCTGTGGCAAACTGAACCCTAAAACTACGCCAAGTTAAAAAACCTGAGTATGAAATTGACCACACAACAAAATAAACAACTTTATCACTAGTCATAAAAACATAGCAGCTAAAATAAGATAAAACTGGCAGTACACACGATAAATAACAAtatagatctaggatcagtttaccctaCTCAAATATTACCTTCATCATTAGAGGAACAAAATGCAAAAATGAatttagatcagtgtctaggggcaacttgAAAGTACTCCCGCTCACTGTCCTCTCTCATTGCCTCTCTCTCCATTAGTGGGCCACTAAGGCACTGGTGTATACAGTCAGGCAGAGAAACTAACATTTTTTACCTGTGCGCTACATACAGTTAAAACTACCCCATCACAAGAACAAAACGAAAAAAGCAACAAAGCGAAATGTGACATAAATATGCATGATTTCAAATGTATATTTTCCACACTTAATTAATgttatgaaaatgtataattAACTTAGAAAtaaaaacgcaacaatttcaatgtAAAAGCTTCGGGAAGAGCATGCCTTTTTGTTAACAAATATTTCAattgtttgttttattttcttcaaatTAGGAGAGAAAAAATCACTTGATGGCTTTCTTGTTGAGGTCAAACAGACCCTTAAGTTCCAGCATGGCCTGTTTAATGTTACCCATGAAGCGGTGGgagtcGGTCTCTGGACTAGAGTGTTTGCTGGAGATGTGGAAGTTGATGAGGTCCTCTCCAACAATGATGTAGGAAACTCCGTAACCGTCATCAGCCACCGGGCCAAAGCCTCCTCCGGAGGTGACATAATGAGGGTGTTTGACCAGGTCAAAAAGTTCCACCTGCTGCATTGGAGTCTGACTGGTGGACAGCCTCCAGGGTTCTGACAGAACCTCATGGAGGAAGGGAGAGTCCACTCCCAGGTACTTGGAGATGACGTAAAGGCAGAAGAGGTGACGGTCGATGCCCTTCCCTATCATGGCCTCACGATACATGTTCTGATGCTTCTCTGACGCCTCCTTCAGTAGTCTCATACGCTCCTCTctCCTGAAGTGTGCGAGCTGCAGGGCAATCTGGATGAACGCATCCGGGCTTGTGCGGCACTTCTTGATCAGACCCTTGCCAAAGTCCTTAAAGGGGTAGATGTGCGAGTCCACGTCATCTGCCAGTGCCTGGGCAAACTTCAGAGAGCTCTGGATTGTACTCTGGCACTGCAGGGATGTCCCACTGCAGCCTCTGGGGTCCGGGCAGGTTGGGGTGGGGCTCCCCGTTACAGTGGCCCTCCTCAGTGTAGCCCAGCTCCAGAGGGTCCATGCACAAGACTTGCTCCCAGAGATGGCCTATGATTGGTGCGTCGGCCCAGGCATGCTCGGCATTCAGGCCCATGGTTCCGTTCTTGAAGACGATGAGGTTGAAGGACTTGTCAAACACCTGTCGTAGCATTTGCCGTGGAGGAGGGACTTGGCGTAGCTGTCTAATGATTTCACCGGGTTGTCGATCTCGTATTTCTGTTCTGAGTCGTCGAGGGTTACGAAGAAGGCAGCCTTCTCAATGGCATCCAGTGACTGCTTGTTCTTGCCGCTTCTGAAGTAGGTTTCACGTGCTTTGGCCCATGGTGTCCTCTCCCCTGCGGTGAGCGCAGCCAGGTACTCCTCCCCTTCCTGGGGCTCGCTCTTATCAGCCAGGATCCTCTCCATCTGCTGCTCGATCTCCCGCGGCAACAGCAGGCGCCCATCGTAGAACACCCACACCTTGAAGAAGCGCCCCTTGTTGAAAACGGCGATGTGCTTGCTCTCGTCCACATGCTGAATAGTGTCTGGACATACtcaaaggagggagggaaagagggaagagaggaaagtgGGAGAGGGTGAAAGTGGGAGAGGGTGCAAGGATAGGCAGAACAGCTAATTTATGAGTTTCCGAAACAAAATTCCCTTCCCAGCGGGTAAAGctggttgaaatg
>TU172613
GGTTTAATAAAGTCAAGACAAGACATTGACAGAGACGGGCTCatcttttttgtgtgtgtgtccgtagcAACCATCACTCACCTCATGGAGGAAGGGAGAGTCCACTCCCAGGTACTTGGAGATGACGTAAAGGCAGAAGAGGTGACGGTCGATGCCCTTCCCTATCATGGCCTCACGATACATGTTCTGATGCTTCTCTGACGCCTCCTTCAGTAGTCTCATACGCTCCTCTctCCTGAAGTGTGCGAGCTGCAGGGCAATCTGGATGAACGCATCCGGGCTTGTGCGGCACTTCTTGATCAGACCCTTGCCAAAGTCCTTAAAGGGGTAGATGTGCGAGTCCACGTCATCTGCCAGTGCCTGGGCAAACTTCAGAGAGCTCTGGATTGTACTCTGGCACTCTGCAGGGATGTCCCACTGCAGCCTCTGGGGTCCGGGCAGGTTGGGGTGGGGCTCCCCGTTACAGTGGCCCTCCTCAGTGTAGCCCAGCTCCAGAGGGTCCATGCACAAGACTTGCTCCCAGAGATGGCCTATGATTGGTGCGTCGGCCCAGGCATGCTCGGCATTCAGGCCCATGGTTCCGTTCTTGAAGACGATGAGGTTGAAGGACTTGTCAAACCACCTGTCGTAGCATTTGCCGTGGAGGAGGGACTTGGCGTAGCTGTCTAATGATTTCACCGGGTTGTCGATCTCGTATTTCTGTTCTGAGTCGTCGAGGGTTACGAAGAAGGCAGCCTTCTCAATGGCATCCAGTGACTGCTTGTTCTTGCCGCTTCTGAAGTAGGTTTCACGTGCTTTGGCCCATGGTGTCCTCTCCATCTGCTGCTCGATCTCCCGCGGCAACAGCAGGCGCCCATCGTAGAACACCCACACCTTGAAGAAGCGCCCCTTGTTGAAAACGGCGATGTGCTTGCTCTCGTCCACATGCTGAATAGTGTCTGGACATACtcaaaggagggagggaaagagggaagagaggaaagtgGGAGAGGGTGAAAGTGGGAGAGGGTGCAAGGATAGGCAGAACAGCTAATTTATGAGTTTCCGAAACAAAATTCCCTTCCCAGCGGGTAAAGctggttgaaatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172611 False 3249 TUCP 0.44 9 47194893 47205433
TU172613 True 1088 lncRNA 0.48 6 47194893 47202367

Neighbor

gene id symbol gene type direction distance location
si:dkeyp-19e1.3 LOC106560684 coding downstream 64376 47033009 ~ 47130517 (-)
tmem86a tmem86a coding downstream 273285 46844180 ~ 46921608 (-)
b4galnt4a b4galnt4 coding downstream 438890 46318557 ~ 46756003 (-)
LOC118940396 LOC106604981 coding downstream 602170 46589886 ~ 46592723 (-)
abtb2b abtb2 coding downstream 905550 46139256 ~ 46289343 (-)
si:ch211-236l14.4 LOC106560706 coding upstream 24999 47227366 ~ 47311705 (-)
mrpl23 LOC105008177 coding upstream 662445 47864812 ~ 47998457 (-)
phlda2 phla2 coding upstream 1072707 48275074 ~ 48277572 (-)
nap1l4a LOC106560703 coding upstream 1116853 48319220 ~ 48384812 (-)
commd9 commd9 coding upstream 1246776 48449143 ~ 48457258 (-)
G150681 NA non-coding downstream 17074 47176737 ~ 47177819 (-)
G150586 spty2d1 non-coding downstream 225817 46967505 ~ 46969076 (-)
G150609 NA non-coding downstream 244387 46950272 ~ 46950506 (-)
G150596 NA non-coding downstream 263544 46930978 ~ 46931349 (-)
G150758 NA non-coding upstream 3779 47206146 ~ 47206386 (-)
G150759 NA non-coding upstream 4393 47206760 ~ 47206959 (-)
G150771 NA non-coding upstream 33739 47236106 ~ 47236306 (-)
G150779 NA non-coding upstream 42118 47244485 ~ 47244802 (-)
G150618 NA other downstream 201228 46964734 ~ 46993665 (-)
G150290 NA other downstream 345277 46846152 ~ 46849616 (-)
LOC110490531 LOC106560723 other downstream 2026794 45134476 ~ 45168260 (-)
G147800 NA other downstream 2331334 44863085 ~ 44863559 (-)
G151474 NA other upstream 648418 47850785 ~ 47851348 (-)
G151875 NA other upstream 985591 48187958 ~ 48188278 (-)
G151920 NA other upstream 1023932 48226299 ~ 48226944 (-)
G152024 NA other upstream 1100944 48303311 ~ 48303663 (-)
G154300 NA other upstream 2899063 50101430 ~ 50107447 (-)

Expression


Co-expression Network