G151700


Basic Information

Item Value
gene id G151700
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 47922543 ~ 47958534 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU173715
aaacacacatagagagaaacacacacagagagaaagaaacacacacacagagaaagacacatacagagagaaaaaacacacagagagagagaaaaaaacacagagagagagaaacacacagagagagagaaagaaacacacagagagagagaaagaaacacacagagagagagaaagaaacacacagagagagagaaagaaacacacacagagagagaaagaaacactcacacagagagagagaaagaaacactcacacagagagagagaaagaaacactcacacagagaaagaaacacacacacagagagaaagaaacacacacacacagagaaagaaacacacacacagagagaaagaaacacacacacacagagaaagaaacacacacacagagagaaagaaacacacacacagagagaaagaaacacacacacacagagaaggaaacacacatagagagaaaaacacatacacagagagaaagaaacacacacacacacacagaaataaacacagaaacacacacagagagaaagaaacacacacagagagaaagaaacacacacacagagaaaacaacacacacacatacagatagacacagacacacacacacacacaaacacacagggacacaggcacacacacagagagacacacacacacacagagggggacACACTGAgatagaaacacagacacacacacttacacacacagagatacacacacacactgagagagacaaacacacacacacacacagagagggggacacaccgagagagaaacacagacacacacacagagagacacacacacactgagagagatacacacacacacacacacacacagagagacacacacacagacacaaacagatagacacacacatagatggagacacacacacacacagaaataaacacagaaacacacacacagagaaagaaacacacacacagagaaaacaacacacacacaaacacacaggcacacacacacagagacacacacacacacacacagagggggacacactgagatagacacacacacacagatacacacttacacacacagagatacacacacacacacactgagagagacaaacacacacacacacacacagagggggacacaccgagagagaaacacagacacacacacagagagacacacacacactgagagagatacacacacacacagagagacacacacacagacacaaacagatagacacacacagagatggagacacacacacacacacagagagacacacacacagacacaaagagacacatacacaaagagagacacacacagagagagagagagagcgagagagagagagagagagagacacacacacacacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173715 True 1398 lncRNA 0.39 3 47922543 47958534

Neighbor

gene id symbol gene type direction distance location
si:ch211-236l14.4 LOC106560706 coding downstream 610838 47227366 ~ 47311705 (-)
si:dkeyp-19e1.3 LOC106560684 coding downstream 792026 47033009 ~ 47130517 (-)
tmem86a tmem86a coding downstream 1000935 46844180 ~ 46921608 (-)
b4galnt4a b4galnt4 coding downstream 1166540 46318557 ~ 46756003 (-)
phlda2 phla2 coding upstream 316540 48275074 ~ 48277572 (-)
nap1l4a LOC106560703 coding upstream 360686 48319220 ~ 48384812 (-)
commd9 commd9 coding upstream 490609 48449143 ~ 48457258 (-)
th th coding upstream 579296 48537830 ~ 48560832 (-)
ptdss2 ptdss2 coding upstream 702917 48661451 ~ 48697994 (-)
G151698 NA non-coding downstream 1822 47919995 ~ 47920721 (-)
G151475 NA non-coding downstream 66982 47855103 ~ 47855561 (-)
G151466 NA non-coding downstream 77358 47844821 ~ 47845185 (-)
G151465 NA non-coding downstream 78724 47843473 ~ 47843819 (-)
G151458 NA non-coding downstream 81443 47840898 ~ 47841100 (-)
G151816 NA non-coding upstream 169940 48128474 ~ 48128710 (-)
G151815 NA non-coding upstream 170338 48128872 ~ 48129488 (-)
G151814 NA non-coding upstream 172999 48131533 ~ 48133957 (-)
G151842 NA non-coding upstream 176245 48134779 ~ 48135018 (-)
G151854 NA non-coding upstream 189427 48147961 ~ 48148246 (-)
G151474 NA other downstream 71195 47850785 ~ 47851348 (-)
G150675 LOC100653436 other downstream 717110 47194893 ~ 47205433 (-)
G150618 NA other downstream 928878 46964734 ~ 46993665 (-)
G151875 NA other upstream 229424 48187958 ~ 48188278 (-)
G151920 NA other upstream 267765 48226299 ~ 48226944 (-)
G152024 NA other upstream 344777 48303311 ~ 48303663 (-)
G154300 NA other upstream 2142896 50101430 ~ 50107447 (-)
G154338 NA other upstream 2198152 50156686 ~ 50157825 (-)

Expression


Co-expression Network