G151533



Basic Information


Item Value
gene id G151533
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 47926931 ~ 47927693 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU173535
gtgtgtgtaagtgggtctccccctctctctgtgtgtgtaagtgggtctccccctctctgtgtgtgtaagtgggtctccccctctctgtgtgtgtatttaaaccTCTAATATCTATACTACTGCCACCATTACCACTAATAGTAGTTATACCTATAATATCTATACTACtgccattaccactagtagtagttatacctctaatatctctactactgcCATTACCACTAGTAACATTTATacctaatatctctactaccaccattaccatGAGTAGCATTTATacctaatatctctactaccaccattaccatGAGTAGCATTTATacctaatatctctactactaccaccattaccatGAGAAGCCTTTATACCTAATAgctctactactaccattattACCATGAGTAGCATTTacacctctaatatctctaccaccaccactattacCATGAGTAGCATTTAcatctctaatatctctactaccaccaccattaccactagtagtagttatacctctaatatctgtactactactaccaccatgaGTAGCAGTTATACATTTAATATCTCTACTACTGccattattACCATGAGTAGCATTTacacctctaatatct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU173535 True 618 lncRNA 0.41 2 47926931 47927693

Neighbor


gene id symbol gene type direction distance location
igf2b igf2 coding upstream 553232 47368180 ~ 47373699 (+)
cpt1ab LOC100653436 coding upstream 721490 47134215 ~ 47205441 (+)
uevld uevld coding upstream 919259 46981686 ~ 47007672 (+)
spty2d1 spty2d1 coding upstream 946176 46966136 ~ 46980755 (+)
LOC118940395 NA coding upstream 2170948 45699197 ~ 45755983 (+)
osbpl5 LOC106560704 coding downstream 99716 48027409 ~ 48133974 (+)
fcsk fuk coding downstream 467290 48394983 ~ 48447787 (+)
LOC118940424 NA coding downstream 485014 48412707 ~ 48417058 (+)
prr5l prr5l coding downstream 553835 48481528 ~ 48501880 (+)
cdkn1cb LOC106560698 coding downstream 808826 48736519 ~ 48738551 (+)
G151487 NA non-coding upstream 63152 47863468 ~ 47863779 (+)
G151486 NA non-coding upstream 63769 47862901 ~ 47863162 (+)
G151481 NA non-coding upstream 65985 47860290 ~ 47860946 (+)
G151482 NA non-coding upstream 66286 47860355 ~ 47860645 (+)
G151473 NA non-coding upstream 71900 47854701 ~ 47855031 (+)
G151535 NA non-coding downstream 1511 47929204 ~ 47930164 (+)
G151643 NA non-coding downstream 212905 48140598 ~ 48140921 (+)
G151648 NA non-coding downstream 219373 48147066 ~ 48147315 (+)
G151890 NA non-coding downstream 272892 48200585 ~ 48200786 (+)
G151906 NA non-coding downstream 289615 48217308 ~ 48217559 (+)
G150997 NA other upstream 379352 47497948 ~ 47547579 (+)
G148191 NA other upstream 2434552 45472082 ~ 45492379 (+)
G147510 NA other upstream 3055431 44870800 ~ 44871500 (+)
G146841 NA other upstream 3497538 44429153 ~ 44429393 (+)
G152167 NA other downstream 629089 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 2170723 50098387 ~ 50100624 (+)
G154859 NA other downstream 3237722 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 3394103 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 3484573 51412121 ~ 51417154 (+)

Expression



Co-expression Network