G151535


Basic Information

Item Value
gene id G151535
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 47929204 ~ 47930164 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU173539
ctactactaccaccataaccactagtatcatttatacctctaatatctctactaccaccaccattaccatGAGTAGCATTTATacctaatatctctactaccaccaccattaccatGAGTAGCATGTATacctaatatctctactactgcCACCATTACCATGAGTAGCAGTTATAtctaatatctctactaccaccaccattaccatGAGTAGCATTTATacctaatatctctactaccaccaccattaccatGAGTAGCATGTATacctaatatctctactactgcCACCATTACCATGAGTAGCAGTTATACCTAATATCTCTACTGCCACCATTATCATGAGTAGCATTTATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173539 True 358 lncRNA 0.40 2 47929204 47930164

Neighbor

gene id symbol gene type direction distance location
igf2b igf2 coding upstream 555505 47368180 ~ 47373699 (+)
cpt1ab LOC100653436 coding upstream 723763 47134215 ~ 47205441 (+)
uevld uevld coding upstream 921532 46981686 ~ 47007672 (+)
spty2d1 spty2d1 coding upstream 948449 46966136 ~ 46980755 (+)
LOC118940395 NA coding upstream 2173221 45699197 ~ 45755983 (+)
osbpl5 LOC106560704 coding downstream 97245 48027409 ~ 48133974 (+)
fcsk fuk coding downstream 464819 48394983 ~ 48447787 (+)
LOC118940424 NA coding downstream 482543 48412707 ~ 48417058 (+)
prr5l prr5l coding downstream 551364 48481528 ~ 48501880 (+)
cdkn1cb LOC106560698 coding downstream 806355 48736519 ~ 48738551 (+)
G151533 NA non-coding upstream 1511 47926931 ~ 47927693 (+)
G151487 NA non-coding upstream 65425 47863468 ~ 47863779 (+)
G151486 NA non-coding upstream 66042 47862901 ~ 47863162 (+)
G151481 NA non-coding upstream 68258 47860290 ~ 47860946 (+)
G151482 NA non-coding upstream 68559 47860355 ~ 47860645 (+)
G151643 NA non-coding downstream 210434 48140598 ~ 48140921 (+)
G151648 NA non-coding downstream 216902 48147066 ~ 48147315 (+)
G151890 NA non-coding downstream 270421 48200585 ~ 48200786 (+)
G151906 NA non-coding downstream 287144 48217308 ~ 48217559 (+)
G151917 NA non-coding downstream 295120 48225284 ~ 48225603 (+)
G150997 NA other upstream 381625 47497948 ~ 47547579 (+)
G148191 NA other upstream 2436825 45472082 ~ 45492379 (+)
G147510 NA other upstream 3057704 44870800 ~ 44871500 (+)
G146841 NA other upstream 3499811 44429153 ~ 44429393 (+)
G152167 NA other downstream 626618 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 2168252 50098387 ~ 50100624 (+)
G154859 NA other downstream 3235251 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 3391632 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 3482102 51412121 ~ 51417154 (+)

Expression


Co-expression Network