G151643


Basic Information

Item Value
gene id G151643
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48140598 ~ 48140921 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU173655
CGCTCAGGGATACAGTATCTCTGTCATTGGGATATGAAAATAACTCATggatatggggcggcaggtagcctagtggttagagcgctgggccagtaaccgaaaggtttctagatcaaatcccctagctgacaaggtaaaaatctgtcgttctgcccctgaacaaggcagttaacccactgttcctaggccgtcattgtaaataagaatttgttcttaactgacttgcctagttaaataaataaaacaaatctatATATTGGGTCATGTCAATATGACTCGAGGGTTTCTATGAAAACCATGTCCTCATTGCTACCAACATCATCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173655 True 324 lncRNA 0.39 1 48140598 48140921

Neighbor

gene id symbol gene type direction distance location
osbpl5 LOC106560704 coding upstream 6624 48027409 ~ 48133974 (+)
igf2b igf2 coding upstream 766899 47368180 ~ 47373699 (+)
cpt1ab LOC100653436 coding upstream 935157 47134215 ~ 47205441 (+)
uevld uevld coding upstream 1132926 46981686 ~ 47007672 (+)
spty2d1 spty2d1 coding upstream 1159843 46966136 ~ 46980755 (+)
fcsk fuk coding downstream 254062 48394983 ~ 48447787 (+)
LOC118940424 NA coding downstream 271786 48412707 ~ 48417058 (+)
prr5l prr5l coding downstream 340607 48481528 ~ 48501880 (+)
cdkn1cb LOC106560698 coding downstream 595598 48736519 ~ 48738551 (+)
LOC110490948 LOC106560694 coding downstream 1608192 49749113 ~ 49767125 (+)
G151535 NA non-coding upstream 210434 47929204 ~ 47930164 (+)
G151533 NA non-coding upstream 212905 47926931 ~ 47927693 (+)
G151487 NA non-coding upstream 276819 47863468 ~ 47863779 (+)
G151486 NA non-coding upstream 277436 47862901 ~ 47863162 (+)
G151481 NA non-coding upstream 279652 47860290 ~ 47860946 (+)
G151648 NA non-coding downstream 6145 48147066 ~ 48147315 (+)
G151890 NA non-coding downstream 59664 48200585 ~ 48200786 (+)
G151906 NA non-coding downstream 76387 48217308 ~ 48217559 (+)
G151917 NA non-coding downstream 84363 48225284 ~ 48225603 (+)
G151942 NA non-coding downstream 100305 48241226 ~ 48241518 (+)
G150997 NA other upstream 593019 47497948 ~ 47547579 (+)
G148191 NA other upstream 2648219 45472082 ~ 45492379 (+)
G147510 NA other upstream 3269098 44870800 ~ 44871500 (+)
G146841 NA other upstream 3711205 44429153 ~ 44429393 (+)
G152167 NA other downstream 415861 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 1957495 50098387 ~ 50100624 (+)
G154859 NA other downstream 3024494 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 3180875 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 3271345 51412121 ~ 51417154 (+)

Expression


Co-expression Network