G151648



Basic Information


Item Value
gene id G151648
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48147066 ~ 48147315 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU173660
ttctgcagcgatacgccattccattTGGTTTGGCTTAGTGGAaatattgtttgtttttcaaaaggacaatgacccaaaacacacctccaggctgtgtaggggctatttgaccaagaaggagtgatggagtgctgcatcagatgtcctAGCCTCCAATCACCTGATCTCAACCCAATCgagatggttagggatgagttggactgcagagataaggaaaagcacccaacaagtgctcagcatatgtgggaac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU173660 True 250 lncRNA 0.36 1 48147066 48147315

Neighbor


gene id symbol gene type direction distance location
osbpl5 LOC106560704 coding upstream 13092 48027409 ~ 48133974 (+)
igf2b igf2 coding upstream 773367 47368180 ~ 47373699 (+)
cpt1ab LOC100653436 coding upstream 941625 47134215 ~ 47205441 (+)
uevld uevld coding upstream 1139394 46981686 ~ 47007672 (+)
spty2d1 spty2d1 coding upstream 1166311 46966136 ~ 46980755 (+)
fcsk fuk coding downstream 247668 48394983 ~ 48447787 (+)
LOC118940424 NA coding downstream 265392 48412707 ~ 48417058 (+)
prr5l prr5l coding downstream 334213 48481528 ~ 48501880 (+)
cdkn1cb LOC106560698 coding downstream 589204 48736519 ~ 48738551 (+)
LOC110490948 LOC106560694 coding downstream 1601798 49749113 ~ 49767125 (+)
G151643 NA non-coding upstream 6145 48140598 ~ 48140921 (+)
G151535 NA non-coding upstream 216902 47929204 ~ 47930164 (+)
G151533 NA non-coding upstream 219373 47926931 ~ 47927693 (+)
G151487 NA non-coding upstream 283287 47863468 ~ 47863779 (+)
G151486 NA non-coding upstream 283904 47862901 ~ 47863162 (+)
G151890 NA non-coding downstream 53270 48200585 ~ 48200786 (+)
G151906 NA non-coding downstream 69993 48217308 ~ 48217559 (+)
G151917 NA non-coding downstream 77969 48225284 ~ 48225603 (+)
G151942 NA non-coding downstream 93911 48241226 ~ 48241518 (+)
G152028 NA non-coding downstream 159269 48306584 ~ 48306825 (+)
G150997 NA other upstream 599487 47497948 ~ 47547579 (+)
G148191 NA other upstream 2654687 45472082 ~ 45492379 (+)
G147510 NA other upstream 3275566 44870800 ~ 44871500 (+)
G146841 NA other upstream 3717673 44429153 ~ 44429393 (+)
G152167 NA other downstream 409467 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 1951101 50098387 ~ 50100624 (+)
G154859 NA other downstream 3018100 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 3174481 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 3264951 51412121 ~ 51417154 (+)

Expression



Co-expression Network