G151942



Basic Information


Item Value
gene id G151942
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48241226 ~ 48241518 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU173979
tttgtacactcagtgtatgtttttAACATAGATGTATTTGTGTTGGAGCTGATGACCATTTGATGCATGCACATCAAACTCAAATGTATGGATTTAGTTTCAATCCATGCAAATGTTGCACATCAAAATCAAATTTAGcctaatgtttttgttttgaattACTAGCATAGCTACTTTGTTGCAGAATGTTGACCCAATTTTTGTTTGATGTCACGCATTTCTGTATGTTGTAATCAGCGGCGGCTGCTGaagggagaacggctcataataatggccgggaacagagcaaatgg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU173979 True 293 lncRNA 0.38 1 48241226 48241518
Loading

Neighbor


gene id symbol gene type direction distance location
osbpl5 LOC106560704 coding upstream 107252 48027409 ~ 48133974 (+)
igf2b igf2 coding upstream 867527 47368180 ~ 47373699 (+)
cpt1ab LOC100653436 coding upstream 1035785 47134215 ~ 47205441 (+)
uevld uevld coding upstream 1233554 46981686 ~ 47007672 (+)
spty2d1 spty2d1 coding upstream 1260471 46966136 ~ 46980755 (+)
fcsk fuk coding downstream 153465 48394983 ~ 48447787 (+)
LOC118940424 NA coding downstream 171189 48412707 ~ 48417058 (+)
prr5l prr5l coding downstream 240010 48481528 ~ 48501880 (+)
cdkn1cb LOC106560698 coding downstream 495001 48736519 ~ 48738551 (+)
LOC110490948 LOC106560694 coding downstream 1507595 49749113 ~ 49767125 (+)
G151917 NA non-coding upstream 15623 48225284 ~ 48225603 (+)
G151906 NA non-coding upstream 23667 48217308 ~ 48217559 (+)
G151890 NA non-coding upstream 40440 48200585 ~ 48200786 (+)
G151648 NA non-coding upstream 93911 48147066 ~ 48147315 (+)
G151643 NA non-coding upstream 100305 48140598 ~ 48140921 (+)
G152028 NA non-coding downstream 65066 48306584 ~ 48306825 (+)
G152039 NA non-coding downstream 72143 48313661 ~ 48313869 (+)
G152043 NA non-coding downstream 75806 48317324 ~ 48317559 (+)
G152045 NA non-coding downstream 77578 48319096 ~ 48319258 (+)
G152095 NA non-coding downstream 207625 48449143 ~ 48449723 (+)
G150997 NA other upstream 693647 47497948 ~ 47547579 (+)
G148191 NA other upstream 2748847 45472082 ~ 45492379 (+)
G147510 NA other upstream 3369726 44870800 ~ 44871500 (+)
G146841 NA other upstream 3811833 44429153 ~ 44429393 (+)
G152167 NA other downstream 315264 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 1856898 50098387 ~ 50100624 (+)
G154859 NA other downstream 2923897 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 3080278 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 3170748 51412121 ~ 51417154 (+)

Expression


G151942 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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G151942 Expression in each Bioproject

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G151942 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 25.
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Co-expression Network