G152002


Basic Information

Item Value
gene id G152002
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48271615 ~ 48272094 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU174044
GTACTAGTTACCACACCCAGTCCCAGGGATGGTGAACTCTGGAAATTCCTTttttCTTGCACCATATTTGTGGAAAAACCTTCAAAATGTTCTCAAATttgatgttttggtgcctctagggggattcagaaagctgattgaaaACCTTATTACTGATGACTGTGTTTGTTTCTTATGACCGTGTTTTTCTTTCTGtttgcattttgtatttatattgatgtgtgtattttctgtaatttcTGTAATTTAGGGCTCATCTGTTAAAGAGACCTTGATCTCAGTATGACCCACCGataaaataaaactgaaataaaaaatagcagccacatacaaacagcatgaacaTTTTGCTCGTATAATTACTTCTCGCTTCtacgcactctcctcctctcatgatttccccttcgcttgtggacttcagtgcacacacatctgtgaccaggcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174044 True 446 lncRNA 0.38 2 48271615 48272094

Neighbor

gene id symbol gene type direction distance location
mrpl23 LOC105008177 coding downstream 273158 47864812 ~ 47998457 (-)
si:ch211-236l14.4 LOC106560706 coding downstream 959910 47227366 ~ 47311705 (-)
si:dkeyp-19e1.3 LOC106560684 coding downstream 1141098 47033009 ~ 47130517 (-)
tmem86a tmem86a coding downstream 1350007 46844180 ~ 46921608 (-)
LOC118940396 LOC106604981 coding downstream 1678892 46589886 ~ 46592723 (-)
phlda2 phla2 coding upstream 2980 48275074 ~ 48277572 (-)
nap1l4a LOC106560703 coding upstream 47126 48319220 ~ 48384812 (-)
commd9 commd9 coding upstream 177049 48449143 ~ 48457258 (-)
th th coding upstream 265736 48537830 ~ 48560832 (-)
ptdss2 ptdss2 coding upstream 389357 48661451 ~ 48697994 (-)
G151936 NA non-coding downstream 35661 48234024 ~ 48235954 (-)
G151922 NA non-coding downstream 44090 48227319 ~ 48227525 (-)
G151911 NA non-coding downstream 51621 48219703 ~ 48219994 (-)
G151909 NA non-coding downstream 52641 48218721 ~ 48218974 (-)
G151889 NA non-coding downstream 72013 48199324 ~ 48199602 (-)
G152017 NA non-coding upstream 26252 48298346 ~ 48298589 (-)
G152026 NA non-coding upstream 32870 48304964 ~ 48305183 (-)
G152038 NA non-coding upstream 41202 48313296 ~ 48313529 (-)
G152328 NA non-coding upstream 133078 48405172 ~ 48455258 (-)
G152371 NA non-coding upstream 191729 48463823 ~ 48507440 (-)
G151920 NA other downstream 44671 48226299 ~ 48226944 (-)
G151875 NA other downstream 83337 48187958 ~ 48188278 (-)
G151474 NA other downstream 420267 47850785 ~ 47851348 (-)
G150675 LOC100653436 other downstream 1066182 47194893 ~ 47205433 (-)
G150618 NA other downstream 1277950 46964734 ~ 46993665 (-)
G152024 NA other upstream 31217 48303311 ~ 48303663 (-)
G154300 NA other upstream 1829336 50101430 ~ 50107447 (-)
G154338 NA other upstream 1884592 50156686 ~ 50157825 (-)
G155003 NA other upstream 2143649 50415743 ~ 50452147 (-)
G155072 NA other upstream 2307704 50579798 ~ 50581349 (-)

Expression


Co-expression Network