G152017



Basic Information


Item Value
gene id G152017
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48298346 ~ 48298589 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU174062
tgctgtagctttaagatttcccttcactggaactaaggggcctagcctgaaccatgaaaacagccccagaccattattcttcctccaccaagcTTTACATAACTCCAGCCGATTCTTaacattgcacatggtgatcttaggctagtgtgctgctgctcggccatggaaacccatttcataatgctcccgacgaacagttgatgttgcttccagagaaagtttggaactcggtagtgagtgttaa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU174062 True 244 lncRNA 0.45 1 48298346 48298589

Neighbor


gene id symbol gene type direction distance location
phlda2 phla2 coding downstream 20774 48275074 ~ 48277572 (-)
mrpl23 LOC105008177 coding downstream 299889 47864812 ~ 47998457 (-)
si:ch211-236l14.4 LOC106560706 coding downstream 986641 47227366 ~ 47311705 (-)
si:dkeyp-19e1.3 LOC106560684 coding downstream 1167829 47033009 ~ 47130517 (-)
tmem86a tmem86a coding downstream 1376738 46844180 ~ 46921608 (-)
nap1l4a LOC106560703 coding upstream 20631 48319220 ~ 48384812 (-)
commd9 commd9 coding upstream 150554 48449143 ~ 48457258 (-)
th th coding upstream 239241 48537830 ~ 48560832 (-)
ptdss2 ptdss2 coding upstream 362862 48661451 ~ 48697994 (-)
LOC118940428 NA coding upstream 402860 48701449 ~ 48711230 (-)
G152002 NA non-coding downstream 26252 48271615 ~ 48272094 (-)
G151936 NA non-coding downstream 62392 48234024 ~ 48235954 (-)
G151922 NA non-coding downstream 70821 48227319 ~ 48227525 (-)
G151911 NA non-coding downstream 78352 48219703 ~ 48219994 (-)
G151909 NA non-coding downstream 79372 48218721 ~ 48218974 (-)
G152026 NA non-coding upstream 6375 48304964 ~ 48305183 (-)
G152038 NA non-coding upstream 14707 48313296 ~ 48313529 (-)
G152328 NA non-coding upstream 106583 48405172 ~ 48455258 (-)
G152371 NA non-coding upstream 165234 48463823 ~ 48507440 (-)
G152375 NA non-coding upstream 173467 48472056 ~ 48476174 (-)
G151920 NA other downstream 71402 48226299 ~ 48226944 (-)
G151875 NA other downstream 110068 48187958 ~ 48188278 (-)
G151474 NA other downstream 446998 47850785 ~ 47851348 (-)
G150675 LOC100653436 other downstream 1092913 47194893 ~ 47205433 (-)
G150618 NA other downstream 1304681 46964734 ~ 46993665 (-)
G152024 NA other upstream 4722 48303311 ~ 48303663 (-)
G154300 NA other upstream 1802841 50101430 ~ 50107447 (-)
G154338 NA other upstream 1858097 50156686 ~ 50157825 (-)
G155003 NA other upstream 2117154 50415743 ~ 50452147 (-)
G155072 NA other upstream 2281209 50579798 ~ 50581349 (-)

Expression



Co-expression Network