G152043


Basic Information

Item Value
gene id G152043
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48317324 ~ 48317559 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU174088
ccggggcaCAGTGGGTTACCAGCCTTGTTCATTGTCAGAACAGCAGATTCTTACCTCCTCAGTCTCAGGGAttagatccagcaacctttcggttactggcccaatgttctaaccactaagctacctacCGCCCAAAAGACAGTTaatgtaaactcaccccattctgtACAAATGTGCACAACCGCAACATTCATACAAGCGAGCCTACAAAGAAAACTAACGGGACTGTAgagact

Function

NR:

description
PREDICTED: extracellular serine/threonine protein kinase FAM20C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174088 True 236 lncRNA 0.48 1 48317324 48317559

Neighbor

gene id symbol gene type direction distance location
osbpl5 LOC106560704 coding upstream 183350 48027409 ~ 48133974 (+)
igf2b igf2 coding upstream 943625 47368180 ~ 47373699 (+)
cpt1ab LOC100653436 coding upstream 1111883 47134215 ~ 47205441 (+)
uevld uevld coding upstream 1309652 46981686 ~ 47007672 (+)
spty2d1 spty2d1 coding upstream 1336569 46966136 ~ 46980755 (+)
fcsk fuk coding downstream 77424 48394983 ~ 48447787 (+)
LOC118940424 NA coding downstream 95148 48412707 ~ 48417058 (+)
prr5l prr5l coding downstream 163969 48481528 ~ 48501880 (+)
cdkn1cb LOC106560698 coding downstream 418960 48736519 ~ 48738551 (+)
LOC110490948 LOC106560694 coding downstream 1431554 49749113 ~ 49767125 (+)
G152039 NA non-coding upstream 3455 48313661 ~ 48313869 (+)
G152028 NA non-coding upstream 10499 48306584 ~ 48306825 (+)
G151942 NA non-coding upstream 75806 48241226 ~ 48241518 (+)
G151917 NA non-coding upstream 91721 48225284 ~ 48225603 (+)
G151906 NA non-coding upstream 99765 48217308 ~ 48217559 (+)
G152045 NA non-coding downstream 1537 48319096 ~ 48319258 (+)
G152095 NA non-coding downstream 131584 48449143 ~ 48449723 (+)
G152138 NA non-coding downstream 196240 48513799 ~ 48515392 (+)
G152139 NA non-coding downstream 198952 48516511 ~ 48516959 (+)
G152140 NA non-coding downstream 200753 48518312 ~ 48518642 (+)
G150997 NA other upstream 769745 47497948 ~ 47547579 (+)
G148191 NA other upstream 2824945 45472082 ~ 45492379 (+)
G147510 NA other upstream 3445824 44870800 ~ 44871500 (+)
G146841 NA other upstream 3887931 44429153 ~ 44429393 (+)
G152167 NA other downstream 239223 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 1780857 50098387 ~ 50100624 (+)
G154859 NA other downstream 2847856 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 3004237 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 3094707 51412121 ~ 51417154 (+)

Expression


Co-expression Network