G152045


Basic Information

Item Value
gene id G152045
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48319096 ~ 48319258 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU174090
TCACAAACCGAAGGCCTACTACAGGTTCGCCACTGCATAAACAGGTCTATAATCTTAGCCTTTATATCTGTTTAAACAaaggattatgtgtgtgtgtatatatacacacacacagcctggcagagcggttttatttatttaattttctaGTACAAATATATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174090 True 163 lncRNA 0.36 1 48319096 48319258

Neighbor

gene id symbol gene type direction distance location
osbpl5 LOC106560704 coding upstream 185122 48027409 ~ 48133974 (+)
igf2b igf2 coding upstream 945397 47368180 ~ 47373699 (+)
cpt1ab LOC100653436 coding upstream 1113655 47134215 ~ 47205441 (+)
uevld uevld coding upstream 1311424 46981686 ~ 47007672 (+)
spty2d1 spty2d1 coding upstream 1338341 46966136 ~ 46980755 (+)
fcsk fuk coding downstream 75725 48394983 ~ 48447787 (+)
LOC118940424 NA coding downstream 93449 48412707 ~ 48417058 (+)
prr5l prr5l coding downstream 162270 48481528 ~ 48501880 (+)
cdkn1cb LOC106560698 coding downstream 417261 48736519 ~ 48738551 (+)
LOC110490948 LOC106560694 coding downstream 1429855 49749113 ~ 49767125 (+)
G152043 NA non-coding upstream 1537 48317324 ~ 48317559 (+)
G152039 NA non-coding upstream 5227 48313661 ~ 48313869 (+)
G152028 NA non-coding upstream 12271 48306584 ~ 48306825 (+)
G151942 NA non-coding upstream 77578 48241226 ~ 48241518 (+)
G151917 NA non-coding upstream 93493 48225284 ~ 48225603 (+)
G152095 NA non-coding downstream 129885 48449143 ~ 48449723 (+)
G152138 NA non-coding downstream 194541 48513799 ~ 48515392 (+)
G152139 NA non-coding downstream 197253 48516511 ~ 48516959 (+)
G152140 NA non-coding downstream 199054 48518312 ~ 48518642 (+)
G152142 NA non-coding downstream 201851 48521109 ~ 48521432 (+)
G150997 NA other upstream 771517 47497948 ~ 47547579 (+)
G148191 NA other upstream 2826717 45472082 ~ 45492379 (+)
G147510 NA other upstream 3447596 44870800 ~ 44871500 (+)
G146841 NA other upstream 3889703 44429153 ~ 44429393 (+)
G152167 NA other downstream 237524 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 1779158 50098387 ~ 50100624 (+)
G154859 NA other downstream 2846157 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 3002538 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 3093008 51412121 ~ 51417154 (+)

Expression


Co-expression Network