G152328


Basic Information

Item Value
gene id G152328
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48405172 ~ 48455258 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU174401
cttcctgggccattcaaggacattcatagacttgtcccgaagccactcctgtgttgtcttggctgtgtacttagggtcattgtcctgttggaaggtaaaccttcaccccagttgGAGTTCCTgggcgctctggagtaggttttcgtcaaggatctctctgtactttgctccgttcatctttccctcgatcctgactagtctcccagtccctgcggctgaaaaacatccccacagcatgatgctgccaccacgcttcaccatagggatggtgccaagtttcctccaggcgtgacgcttggcattcaggccaaaaatggttcaatcttggttttctcagaccatgagaaacaaggttctttggtctgaggaaaccaagattgaactctttggccggaatgccaagcgtcacgtctggacgaaacctggcaccatccctacggtgaagcatggtgatggcagcatcatgctgtgggatgtttttcagcggcagggacagggagactagtcaggatagagggaaagatgaacggagcaaagtagagagagatccttgatgaaaaccagctccatagcactcaggacctcagactggggcaaaggttcaccttccaacaggacaacgacactaagacaatgcaagagtggcttcaggactagcctcaatgtccttgagtggcccagccagagcccagacttgaacctgatcgaacacctctggagagacctgcaaaTAGATGTGCagggacgctccccatccaacctgacagagcttgagatgatctgcagcgaagaatggtagaaactccaaatacaggtgtgccaacaaatacaggtgtgccaagcttgtagcatcatacccaagaagactcgaggctgtaatcgctgccaaaggcgcttcaacaaagtactgagtaaagggtctgaatacttatgtaaatgtaagaacatgtcattgtatgctgtagagataagatttcccttcactgaactAAGGGGTCGgaaccattaaaaacagccccagagcaATATTCCTACTGCACCAAACTGTACAGTttccactatgcattggggcaggtagcgttctccttgcATACACCAAACCCAGTtttgtccgtcggactgtcagatggtgaagtgtgattcatctaGGGTTGCAAAAGGGTCGGAAATTTTCCATGAGAAGTTAAGGCCGGGAATTTAGGTAATTATgtttaaattcattttttttaaaaattttattagcttataacagtgaaccatTTTTGTGGGATACAAGgtaattctaggtcttgtggcatattttggttaaactacccccaattcaatggaattgcaagcctctgcatgcacagtgcattcttccatcacatgtacagctgattctcaagatcttgcacactaatgaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174401 True 1407 lncRNA 0.47 2 48405172 48455258

Neighbor

gene id symbol gene type direction distance location
nap1l4a LOC106560703 coding downstream 20360 48319220 ~ 48384812 (-)
phlda2 phla2 coding downstream 127600 48275074 ~ 48277572 (-)
mrpl23 LOC105008177 coding downstream 406715 47864812 ~ 47998457 (-)
si:ch211-236l14.4 LOC106560706 coding downstream 1093467 47227366 ~ 47311705 (-)
si:dkeyp-19e1.3 LOC106560684 coding downstream 1274655 47033009 ~ 47130517 (-)
th th coding upstream 82572 48537830 ~ 48560832 (-)
ptdss2 ptdss2 coding upstream 206193 48661451 ~ 48697994 (-)
LOC118940428 NA coding upstream 246191 48701449 ~ 48711230 (-)
trnas-gcu NA coding upstream 355094 48810352 ~ 48810433 (-)
trnas-gcu-2 NA coding upstream 356213 48809911 ~ 48812873 (-)
G152038 NA non-coding downstream 91643 48313296 ~ 48313529 (-)
G152026 NA non-coding downstream 99989 48304964 ~ 48305183 (-)
G152017 NA non-coding downstream 106583 48298346 ~ 48298589 (-)
G152002 NA non-coding downstream 133078 48271615 ~ 48272094 (-)
G151936 NA non-coding downstream 169218 48234024 ~ 48235954 (-)
G152371 NA non-coding upstream 8565 48463823 ~ 48507440 (-)
G152375 NA non-coding upstream 16798 48472056 ~ 48476174 (-)
G152395 NA non-coding upstream 54858 48510116 ~ 48512784 (-)
G152399 NA non-coding upstream 62855 48518113 ~ 48518348 (-)
G152403 NA non-coding upstream 67910 48523168 ~ 48523379 (-)
G152024 NA other downstream 101509 48303311 ~ 48303663 (-)
G151920 NA other downstream 178228 48226299 ~ 48226944 (-)
G151875 NA other downstream 216894 48187958 ~ 48188278 (-)
G151474 NA other downstream 553824 47850785 ~ 47851348 (-)
G150675 LOC100653436 other downstream 1199739 47194893 ~ 47205433 (-)
G154300 NA other upstream 1646172 50101430 ~ 50107447 (-)
G154338 NA other upstream 1701428 50156686 ~ 50157825 (-)
G155003 NA other upstream 1960485 50415743 ~ 50452147 (-)
G155072 NA other upstream 2124540 50579798 ~ 50581349 (-)
G155281 LOC106560681 other upstream 2515818 50971076 ~ 50971935 (-)

Expression


Co-expression Network