G152095


Basic Information

Item Value
gene id G152095
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48449143 ~ 48449723 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU174140
TTCAGCATTAATCTCTTCATTTATTGACATAAACATTGAATTCAAAAGACCCTCTTGACTCTACTGACAGAACAAGGAGGAATGTAGTGGCACTACCAGATCAGTGCTAATGATGGGATTGTGTGTACTTGTTTGTTTCTTCCCCCCGGGACTAGAGGAACGAGTCTCTTCTTCTTTTCCATCTTTTAGCCCATGTCTAAAATTGCTACCTCTTATTTCCCACCTTCCTTAAAACGGCACTGACGTCGTGTGAGCCACTTTATCAAGTGTTTACATTTGAGACTTTTATGTTTATTAGTAGAAAATGGGCACCCATAATTGATTTCTCTGTTTTCAGATTTGTGCAGATAAATGAGATGAGTAAAAGTCACTTTAGAGTATCAAGAATGATGTACCCAAGGCCTCCGGTGTGGCCATTCTGGTGAGGGGTCTCATTTTCCGGCCACCACTGACAATTGGTCACGGATCCGGCCCAGGCCGTCCAGCATGGTGTCCAGAGTTTCCTTGCTCAACTCCACCGTGACCGATGAGAGAGCGCCACTGCCCCTTAGACAGCTGGAG

Function

NR:

description
COMM domain-containing protein 9 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174140 True 561 lncRNA 0.55 2 48449143 48449723

Neighbor

gene id symbol gene type direction distance location
fcsk fuk coding upstream 1356 48394983 ~ 48447787 (+)
LOC118940424 NA coding upstream 32085 48412707 ~ 48417058 (+)
osbpl5 LOC106560704 coding upstream 315169 48027409 ~ 48133974 (+)
igf2b igf2 coding upstream 1075444 47368180 ~ 47373699 (+)
cpt1ab LOC100653436 coding upstream 1243702 47134215 ~ 47205441 (+)
prr5l prr5l coding downstream 31805 48481528 ~ 48501880 (+)
cdkn1cb LOC106560698 coding downstream 286796 48736519 ~ 48738551 (+)
LOC110490948 LOC106560694 coding downstream 1299390 49749113 ~ 49767125 (+)
LOC110491010 LOC106560692 coding downstream 1618486 50068209 ~ 50093310 (+)
LOC110491026 LOC106560691 coding downstream 1648664 50098387 ~ 50100624 (+)
G152045 NA non-coding upstream 129885 48319096 ~ 48319258 (+)
G152043 NA non-coding upstream 131584 48317324 ~ 48317559 (+)
G152039 NA non-coding upstream 135274 48313661 ~ 48313869 (+)
G152028 NA non-coding upstream 142318 48306584 ~ 48306825 (+)
G151942 NA non-coding upstream 207625 48241226 ~ 48241518 (+)
G152138 NA non-coding downstream 64076 48513799 ~ 48515392 (+)
G152139 NA non-coding downstream 66788 48516511 ~ 48516959 (+)
G152140 NA non-coding downstream 68589 48518312 ~ 48518642 (+)
G152142 NA non-coding downstream 71386 48521109 ~ 48521432 (+)
G152145 NA non-coding downstream 78810 48528533 ~ 48528860 (+)
G150997 NA other upstream 901564 47497948 ~ 47547579 (+)
uevld uevld other upstream 1463917 46981686 ~ 47007672 (+)
G148191 NA other upstream 2956764 45472082 ~ 45492379 (+)
G147510 NA other upstream 3577643 44870800 ~ 44871500 (+)
G146841 NA other upstream 4019750 44429153 ~ 44429393 (+)
G152167 NA other downstream 107059 48556782 ~ 48557686 (+)
G154859 NA other downstream 2715692 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 2872073 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 2962543 51412121 ~ 51417154 (+)

Expression


Co-expression Network