G152138


Basic Information

Item Value
gene id G152138
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48513799 ~ 48515392 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU174188
tctggctctggccaaACCTATCGGTTTCTGTGACCAATCAGAACCGTTAGAATGTGTTTGCGTTCTAGCAATTGTTGGGGAGGTattcagatccagactcatttcGGTGAAGAAACGTGGGTGTGGCATAGCATTTGGCCAgagcaaggagtttgggtagccagggAAGTGTTTTCTGGGATTGAATTAGATTTATTCAGTGCACACAAGGAAGCCCCACATGCAAACCTCGTTACACAAGTTTATAGGGTAAGTAAACACCAAATAATGAGTGTTTAAATCAAAAAGTGTAAAAAAGGCATACATTTCCTAAATCTGCATCGGCTCCTATTTGAATTCATCCTCCCTATATAAAGCGAAGCCACTTTAGAAAGGGAACCCAAGTGCCCGCCACAGCTGACGCATCAGGTGCTCGTAACAATCGCACCTACCTTATTTGGCTGTCGATTTAAGGTGACCGGTTCTGCTCACACATTCTGCTGTTGCTCTCTGCTTCCACTAGTATGTATTTGCTTCTTTTGCTGCATTGACGCTCTTGCTGTAATTGGCGGTACTCCCTATGCTGTTGTTTCTGATATGACATTTTCTTTGCAAATTCTCGCTATCTGTGTTTGAATCTCACCCGAGGTCACTCAATCTGCTCATGTTGTAATGTTAGGCTGCTGCGGGGATGTCATTGATTGCGGGGATCAACCACGTTGCTGCTCTAGTGTTGTCAGTCAATAGCCGGCTACAATTAGCTAAGTAGAATTAGCCTCGGGAGTAGCCTATCATATACTTTGTTTGTTCCCAATGCCAGTTTTGTTGTACAAATTATTTCTGCCTATGGTTATTATTCtttggaaccctattcccttacaCTTTTTAAACTAGAAACACATTCAACCTCATTTTCAGACTGGTCTGGATTAGTGCGcttgttcaaatccaggctgtatcacatccggccgtgattgggagtcccatagggcggcacacagttggcccagcgttgtcttggTTTGGCCgtgttaggccgtcattgtaaataagaatttgttcttaactgacttgcctagttaaataaaattaaaaaaaatgtaaacattttttatCCTACACATTTGCTGCTCAGAAAATCTGAGTATATGGTGATGACCATGCTGGTTCCTCATCTAGGAAAGAGACACTTTGTATGTGGACAATTGGTACAGAAGTCTTCCAGCATCTGCTCTCCAACAGCACAGGGACCTGTGGCACAGTCAGGATGAACAGGAAGGGGATGCCGGGATTCGGAAGCAGGAAGATGCAGAGGGGGAGGTTGAGTTCAAGGAGAATggtcaacagctggcagtaaagtggcaCGACAAACGAGACATCCATGTCCTCTCCAGTGTCCATACGTCAACCATGTCGGTCACAGGGATGGAGGACCACCTGACGGAAGAGAGAAACATCAAACCAGACTGTGtgcttgactataacctcaaaatgggggcagTGGATAACGCAGACATGATAAATGTGAAATGCGTTCAGAAAACTGTCCTCAATGGTCACATAGTTCACCACCAAATAGCTGGTGAGATGATTACTGTACAATATGTTTTTGGAC

Function

NR:

description
PREDICTED: piggyBac transposable element-derived protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174188 True 1594 lncRNA 0.44 1 48513799 48515392

Neighbor

gene id symbol gene type direction distance location
prr5l prr5l coding upstream 11919 48481528 ~ 48501880 (+)
fcsk fuk coding upstream 66012 48394983 ~ 48447787 (+)
LOC118940424 NA coding upstream 96741 48412707 ~ 48417058 (+)
osbpl5 LOC106560704 coding upstream 379825 48027409 ~ 48133974 (+)
igf2b igf2 coding upstream 1140100 47368180 ~ 47373699 (+)
cdkn1cb LOC106560698 coding downstream 221127 48736519 ~ 48738551 (+)
LOC110490948 LOC106560694 coding downstream 1233721 49749113 ~ 49767125 (+)
LOC110491010 LOC106560692 coding downstream 1552817 50068209 ~ 50093310 (+)
LOC110491026 LOC106560691 coding downstream 1582995 50098387 ~ 50100624 (+)
LOC110491039 LOC106560690 coding downstream 1635069 50150461 ~ 50159171 (+)
G152095 NA non-coding upstream 64076 48449143 ~ 48449723 (+)
G152045 NA non-coding upstream 194541 48319096 ~ 48319258 (+)
G152043 NA non-coding upstream 196240 48317324 ~ 48317559 (+)
G152039 NA non-coding upstream 199930 48313661 ~ 48313869 (+)
G152028 NA non-coding upstream 206974 48306584 ~ 48306825 (+)
G152139 NA non-coding downstream 1119 48516511 ~ 48516959 (+)
G152140 NA non-coding downstream 2920 48518312 ~ 48518642 (+)
G152142 NA non-coding downstream 5717 48521109 ~ 48521432 (+)
G152145 NA non-coding downstream 13141 48528533 ~ 48528860 (+)
G152146 NA non-coding downstream 13923 48529315 ~ 48529599 (+)
G150997 NA other upstream 966220 47497948 ~ 47547579 (+)
uevld uevld other upstream 1528573 46981686 ~ 47007672 (+)
G148191 NA other upstream 3021420 45472082 ~ 45492379 (+)
G147510 NA other upstream 3642299 44870800 ~ 44871500 (+)
G146841 NA other upstream 4084406 44429153 ~ 44429393 (+)
G152167 NA other downstream 41390 48556782 ~ 48557686 (+)
G154859 NA other downstream 2650023 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 2806404 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 2896874 51412121 ~ 51417154 (+)

Expression


Co-expression Network