G152139


Basic Information

Item Value
gene id G152139
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48516511 ~ 48516959 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU174189
tctccaaacaccccatagggcagacatcccaattattcacaaaaggaagcgacgcagaggacgaagagccggatgcctcgtccggacccgcagaagacaactaggaaagctgccgttaccgtcaatattactcgccaacgtggaattattggacaataaactagacgaggtaagatcacgaatatcctgaatgacgacatggatattcagctagcgggatacacattgcaccggcaggatagaacagcacactcagGTAAGAcgacagctggtgcacgaaatctaaggaagtctctagattttgatTTCCTgaagtatatatatattgtgataaactgcaggccacactacttgcctagagagttctcagctatacttttcgtggctgtttatttaccaccacagacagaagctggcactaagaccgcactcagtcagctgtataagga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174189 True 449 lncRNA 0.46 1 48516511 48516959

Neighbor

gene id symbol gene type direction distance location
prr5l prr5l coding upstream 14631 48481528 ~ 48501880 (+)
fcsk fuk coding upstream 68724 48394983 ~ 48447787 (+)
LOC118940424 NA coding upstream 99453 48412707 ~ 48417058 (+)
osbpl5 LOC106560704 coding upstream 382537 48027409 ~ 48133974 (+)
igf2b igf2 coding upstream 1142812 47368180 ~ 47373699 (+)
cdkn1cb LOC106560698 coding downstream 219560 48736519 ~ 48738551 (+)
LOC110490948 LOC106560694 coding downstream 1232154 49749113 ~ 49767125 (+)
LOC110491010 LOC106560692 coding downstream 1551250 50068209 ~ 50093310 (+)
LOC110491026 LOC106560691 coding downstream 1581428 50098387 ~ 50100624 (+)
LOC110491039 LOC106560690 coding downstream 1633502 50150461 ~ 50159171 (+)
G152138 NA non-coding upstream 1119 48513799 ~ 48515392 (+)
G152095 NA non-coding upstream 66788 48449143 ~ 48449723 (+)
G152045 NA non-coding upstream 197253 48319096 ~ 48319258 (+)
G152043 NA non-coding upstream 198952 48317324 ~ 48317559 (+)
G152039 NA non-coding upstream 202642 48313661 ~ 48313869 (+)
G152140 NA non-coding downstream 1353 48518312 ~ 48518642 (+)
G152142 NA non-coding downstream 4150 48521109 ~ 48521432 (+)
G152145 NA non-coding downstream 11574 48528533 ~ 48528860 (+)
G152146 NA non-coding downstream 12356 48529315 ~ 48529599 (+)
G152166 NA non-coding downstream 38781 48555740 ~ 48556088 (+)
G150997 NA other upstream 968932 47497948 ~ 47547579 (+)
uevld uevld other upstream 1531285 46981686 ~ 47007672 (+)
G148191 NA other upstream 3024132 45472082 ~ 45492379 (+)
G147510 NA other upstream 3645011 44870800 ~ 44871500 (+)
G146841 NA other upstream 4087118 44429153 ~ 44429393 (+)
G152167 NA other downstream 39823 48556782 ~ 48557686 (+)
G154859 NA other downstream 2648456 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 2804837 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 2895307 51412121 ~ 51417154 (+)

Expression


Co-expression Network