G152145


Basic Information

Item Value
gene id G152145
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48528533 ~ 48528860 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU174195
tttattttcaaataactgaaagtgagaggtaatctgaataaagggaaaaatgcCTTTCTTGAACatagggtgagacattcttactaatttgctagagaaccagttcagatttaagtataacttttgtttGACTGACGccttagtgagaggtctaatggtTTAATATTTCATTTCTGCCctctgaattcatattcattatataaataggcccgttaaatttgtctggcttgccgttccaaatcaaattgaatatttttttctcatatcATTTCAAAAACTGTTCCCTAGGTGTAAGCAAGACCATGAGCAAATAGATAAACTGGGATAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174195 True 328 lncRNA 0.33 1 48528533 48528860

Neighbor

gene id symbol gene type direction distance location
prr5l prr5l coding upstream 26653 48481528 ~ 48501880 (+)
fcsk fuk coding upstream 80746 48394983 ~ 48447787 (+)
LOC118940424 NA coding upstream 111475 48412707 ~ 48417058 (+)
osbpl5 LOC106560704 coding upstream 394559 48027409 ~ 48133974 (+)
igf2b igf2 coding upstream 1154834 47368180 ~ 47373699 (+)
cdkn1cb LOC106560698 coding downstream 207659 48736519 ~ 48738551 (+)
LOC110490948 LOC106560694 coding downstream 1220253 49749113 ~ 49767125 (+)
LOC110491010 LOC106560692 coding downstream 1539349 50068209 ~ 50093310 (+)
LOC110491026 LOC106560691 coding downstream 1569527 50098387 ~ 50100624 (+)
LOC110491039 LOC106560690 coding downstream 1621601 50150461 ~ 50159171 (+)
G152142 NA non-coding upstream 7101 48521109 ~ 48521432 (+)
G152140 NA non-coding upstream 9891 48518312 ~ 48518642 (+)
G152139 NA non-coding upstream 11574 48516511 ~ 48516959 (+)
G152138 NA non-coding upstream 13141 48513799 ~ 48515392 (+)
G152095 NA non-coding upstream 78810 48449143 ~ 48449723 (+)
G152146 NA non-coding downstream 455 48529315 ~ 48529599 (+)
G152166 NA non-coding downstream 26880 48555740 ~ 48556088 (+)
G152170 NA non-coding downstream 31709 48560569 ~ 48560800 (+)
G152171 NA non-coding downstream 32217 48561077 ~ 48561336 (+)
G152189 NA non-coding downstream 61521 48590381 ~ 48590691 (+)
G150997 NA other upstream 980954 47497948 ~ 47547579 (+)
uevld uevld other upstream 1543307 46981686 ~ 47007672 (+)
G148191 NA other upstream 3036154 45472082 ~ 45492379 (+)
G147510 NA other upstream 3657033 44870800 ~ 44871500 (+)
G146841 NA other upstream 4099140 44429153 ~ 44429393 (+)
G152167 NA other downstream 27922 48556782 ~ 48557686 (+)
G154859 NA other downstream 2636555 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 2792936 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 2883406 51412121 ~ 51417154 (+)

Expression


Co-expression Network