G152171


Basic Information

Item Value
gene id G152171
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48561077 ~ 48561336 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU174229
CAAAATTAAATGACTACTCCTGTCTGAACACTGATGAACATGGGCAGCACATGCACCAAATATAGAACAGTTTCTTGCTCtgctgccatagaaatataatccatagcacccagctagcacataatgttctgagaaccatatgtttcttagagcttggtaaGAGCATGTTTGTTCAATGGTTATTTTGCATATAACCTTCCCATAAAGTCTGCTACATGTTtcttcatggttctatttaaagtaataTTCTCAAATTATTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174229 True 260 lncRNA 0.34 1 48561077 48561336

Neighbor

gene id symbol gene type direction distance location
prr5l prr5l coding upstream 59197 48481528 ~ 48501880 (+)
fcsk fuk coding upstream 113290 48394983 ~ 48447787 (+)
LOC118940424 NA coding upstream 144019 48412707 ~ 48417058 (+)
osbpl5 LOC106560704 coding upstream 427103 48027409 ~ 48133974 (+)
igf2b igf2 coding upstream 1187378 47368180 ~ 47373699 (+)
cdkn1cb LOC106560698 coding downstream 175183 48736519 ~ 48738551 (+)
LOC110490948 LOC106560694 coding downstream 1187777 49749113 ~ 49767125 (+)
LOC110491010 LOC106560692 coding downstream 1506873 50068209 ~ 50093310 (+)
LOC110491026 LOC106560691 coding downstream 1537051 50098387 ~ 50100624 (+)
LOC110491039 LOC106560690 coding downstream 1589125 50150461 ~ 50159171 (+)
G152170 NA non-coding upstream 277 48560569 ~ 48560800 (+)
G152166 NA non-coding upstream 4989 48555740 ~ 48556088 (+)
G152146 NA non-coding upstream 31478 48529315 ~ 48529599 (+)
G152145 NA non-coding upstream 32217 48528533 ~ 48528860 (+)
G152142 NA non-coding upstream 39645 48521109 ~ 48521432 (+)
G152189 NA non-coding downstream 29045 48590381 ~ 48590691 (+)
G152190 NA non-coding downstream 30520 48591856 ~ 48592089 (+)
G152192 NA non-coding downstream 34666 48596002 ~ 48596704 (+)
G152207 NA non-coding downstream 54474 48615810 ~ 48616129 (+)
G152235 NA non-coding downstream 93955 48655291 ~ 48655631 (+)
G152167 NA other upstream 3391 48556782 ~ 48557686 (+)
G150997 NA other upstream 1013498 47497948 ~ 47547579 (+)
uevld uevld other upstream 1575851 46981686 ~ 47007672 (+)
G148191 NA other upstream 3068698 45472082 ~ 45492379 (+)
G147510 NA other upstream 3689577 44870800 ~ 44871500 (+)
G154859 NA other downstream 2604079 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 2760460 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 2850930 51412121 ~ 51417154 (+)
G155541 NA other downstream 2859511 51420847 ~ 51421122 (+)

Expression


Co-expression Network