G152590


Basic Information

Item Value
gene id G152590
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48790560 ~ 48791014 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU174683
AGTAAGACAATCTTTTGAGGTAGAGTCTACAATCCATAAGCGCAGACAATCTCAACATCTTTTTCTTCAACGTCTTCACTCGGGGTCCTTGTAGGGAACTTAAAGCACTTGAACTGTTGGTGATGAGTTTATTTGATGCTGGGCAAAACTAATATCAGCTATTTTTGTTTACAGTGGGACAGTGACATGTCTTCCTTCCTACTCCTTTGCACATCCTATCACCAAAGCCCACTGATAGGAAGAAAACACAGAAGATCAGCACAGCTCAGGCCATTGACCATCTCATTGTATTTCACAAGGTATATGATGTCCCCTTCTTTGAGCTCAGTATGTGAATCAAATTCCAACAAAGAAGTTGAACAAGGCAATAATTTCTATAATgttttgtatgcatgtgtgtcaAATTGTAGATGAAATCCTTTATCCTAACatgatcgaatccctgagctgacaag

Function

NR:

description
PREDICTED: uncharacterized protein LOC108897147 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174683 True 455 lncRNA 0.39 1 48790560 48791014

Neighbor

gene id symbol gene type direction distance location
cdkn1cb LOC106560698 coding upstream 52009 48736519 ~ 48738551 (+)
prr5l prr5l coding upstream 288680 48481528 ~ 48501880 (+)
fcsk fuk coding upstream 342773 48394983 ~ 48447787 (+)
LOC118940424 NA coding upstream 373502 48412707 ~ 48417058 (+)
osbpl5 LOC106560704 coding upstream 656586 48027409 ~ 48133974 (+)
LOC110490948 LOC106560694 coding downstream 958099 49749113 ~ 49767125 (+)
LOC110491010 LOC106560692 coding downstream 1277195 50068209 ~ 50093310 (+)
LOC110491026 LOC106560691 coding downstream 1307373 50098387 ~ 50100624 (+)
LOC110491039 LOC106560690 coding downstream 1359447 50150461 ~ 50159171 (+)
LOC110491040 LOC106560688 coding downstream 1390286 50181300 ~ 50198685 (+)
G152589 NA non-coding upstream 51 48790210 ~ 48790509 (+)
G152213 LOC106613263 non-coding upstream 85371 48699197 ~ 48705189 (+)
G152183 NA non-coding upstream 129638 48659218 ~ 48660922 (+)
G152182 NA non-coding upstream 132631 48656193 ~ 48657929 (+)
G152235 NA non-coding upstream 134929 48655291 ~ 48655631 (+)
G152591 NA non-coding downstream 462 48791476 ~ 48791675 (+)
G152611 NA non-coding downstream 11966 48802980 ~ 48803181 (+)
G152617 NA non-coding downstream 15136 48806150 ~ 48806424 (+)
G152660 NA non-coding downstream 46700 48837714 ~ 48837938 (+)
G152813 NA non-coding downstream 167871 48958885 ~ 48959144 (+)
G152167 NA other upstream 232874 48556782 ~ 48557686 (+)
G150997 NA other upstream 1242981 47497948 ~ 47547579 (+)
uevld uevld other upstream 1805334 46981686 ~ 47007672 (+)
G148191 NA other upstream 3298181 45472082 ~ 45492379 (+)
G147510 NA other upstream 3919060 44870800 ~ 44871500 (+)
G154859 NA other downstream 2374401 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 2530782 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 2621252 51412121 ~ 51417154 (+)
G155541 NA other downstream 2629833 51420847 ~ 51421122 (+)

Expression


Co-expression Network