G152611


Basic Information

Item Value
gene id G152611
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48802980 ~ 48803181 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU174704
acataaataagaatttgtgggtgtgtgtagagtgtgtttgtgtgtgtgtgtgtgtgccacttcACAGTCCGCATTGTTCCTTGAGGTGTTGTTTAATCTGTTTTTTGTACTGTATGGGTTTTTGAGCTGTGTGTTAACTGGCTGAACAGACAATTCGGTGCTTTTAGCTCGTCAATACTTCTTACAAAGACCAGCAGTGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174704 True 202 lncRNA 0.41 1 48802980 48803181

Neighbor

gene id symbol gene type direction distance location
cdkn1cb LOC106560698 coding upstream 64429 48736519 ~ 48738551 (+)
prr5l prr5l coding upstream 301100 48481528 ~ 48501880 (+)
fcsk fuk coding upstream 355193 48394983 ~ 48447787 (+)
LOC118940424 NA coding upstream 385922 48412707 ~ 48417058 (+)
osbpl5 LOC106560704 coding upstream 669006 48027409 ~ 48133974 (+)
LOC110490948 LOC106560694 coding downstream 945932 49749113 ~ 49767125 (+)
LOC110491010 LOC106560692 coding downstream 1265028 50068209 ~ 50093310 (+)
LOC110491026 LOC106560691 coding downstream 1295206 50098387 ~ 50100624 (+)
LOC110491039 LOC106560690 coding downstream 1347280 50150461 ~ 50159171 (+)
LOC110491040 LOC106560688 coding downstream 1378119 50181300 ~ 50198685 (+)
G152591 NA non-coding upstream 11305 48791476 ~ 48791675 (+)
G152590 NA non-coding upstream 11966 48790560 ~ 48791014 (+)
G152589 NA non-coding upstream 12471 48790210 ~ 48790509 (+)
G152213 LOC106613263 non-coding upstream 97791 48699197 ~ 48705189 (+)
G152183 NA non-coding upstream 142058 48659218 ~ 48660922 (+)
G152617 NA non-coding downstream 2969 48806150 ~ 48806424 (+)
G152660 NA non-coding downstream 34533 48837714 ~ 48837938 (+)
G152813 NA non-coding downstream 155704 48958885 ~ 48959144 (+)
G152825 NA non-coding downstream 168157 48971338 ~ 48971560 (+)
G152832 NA non-coding downstream 173765 48976946 ~ 48977176 (+)
G152167 NA other upstream 245294 48556782 ~ 48557686 (+)
G150997 NA other upstream 1255401 47497948 ~ 47547579 (+)
uevld uevld other upstream 1817754 46981686 ~ 47007672 (+)
G148191 NA other upstream 3310601 45472082 ~ 45492379 (+)
G147510 NA other upstream 3931480 44870800 ~ 44871500 (+)
G154859 NA other downstream 2362234 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 2518615 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 2609085 51412121 ~ 51417154 (+)
G155541 NA other downstream 2617666 51420847 ~ 51421122 (+)

Expression


Co-expression Network