G153015 (peak1)


Basic Information

Item Value
gene id G153015
gene name peak1
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 49217343 ~ 49218426 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU175139
AGTGAGCGGTTACGTAACGGTACAGTGTTCCACTTCTTCCCCTGTGCAAATGGGACTGGGGAGAGTGTAGCGGCACGAAAGTTGGCGAAGCGCGGCTGGCCCCGCATACGGATCTCCATGGCTAGAAGTTCCTCGTCACTCTCATCCCAGCTCTCGTGTTCATCGTCGTCGTTAACTTCACTTTCGTCATCTTCATCCTCATCATCGTCCTCTCCTTCGCTGGAGAACTCAGGGTAGCAGAAGCGCCCTCCTTCGGTGCTGATGACCTCCATACTGTTGCTGAGGGACACCCGCTTTTGGGCAGCCCCTCCACTGCTGCTGCTCCCAATGGCCAAGCAACCAGAAGCGGGGAGTCCTCTCTCTAATGAGCGCTGGAAGGAGCTGCTGATGCGCCCCAAAAAGAGGTCCTTCGACCCGGACAAGGGGCTGGGGCTAGGGCCAGAGCCCAGGCCCGCAATCTCCTTGAGCATGTCAGTCAAACCATTGCCATTCCCACGGGGTGCGCGCTGACTGCGCTGCCTGTAACGCTCAATCTCCTCCACGGCATATTCCCCTTCATTGTTGTTAGGCCCGCCGGGCTTCTTGCGGTTCATCCCATTTCGGGTCCAGACGGTAAAGGCAGAGGTTTTGCCGGGTTCACCAGCGTCTGGTGGCCGATGTAGGTTGCCCTCCAAGTCCAGGTCGGCCGAAGAGCAGGACAGCATCATGGTGGGCTTGACAGCGATTGTGGGCTTCTTAGCCACGGGAGGACGGAAGTGACCAGAGCGGGTTGAGACACCGTCACCGCCTCCCCTCTGGGAGCTGTTACCGTTGGGTCTAGTTCCAGCAGGGGGTTGGCTCTGTTGTTGGGGGGGTTGCTCAGGGGCAATCTTCTTCAGGCCACCCTCGGCCAGGCGGTGCAGGCTCTTGGGCTTAAAGCAGTTCTTGCACTCGCCTGGTTTCCACACATGCTCCGTGAAGGTGTTGCAGGCAGACATGGCTGCTGTCCTGGTGAGGCAGCACGGTGGGTCAGTGGACAGGAAACCCCTCCATGGGAACCACAAAGGCAGGGGAATGGACTATTCTACAGCACCGCTGCCTTCCG

Function

symbol description
peak1 Predicted to enable protein kinase activity. Acts upstream of or within angiogenesis and regulation of blood vessel endothelial cell migration. Orthologous to human PEAK1 (pseudopodium enriched atypical kinase 1).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175139 True 1084 lncRNA 0.59 1 49217343 49218426

Neighbor

gene id symbol gene type direction distance location
cdkn1cb LOC106560698 coding upstream 478792 48736519 ~ 48738551 (+)
prr5l prr5l coding upstream 715463 48481528 ~ 48501880 (+)
fcsk fuk coding upstream 769556 48394983 ~ 48447787 (+)
LOC118940424 NA coding upstream 800285 48412707 ~ 48417058 (+)
osbpl5 LOC106560704 coding upstream 1083369 48027409 ~ 48133974 (+)
LOC110490948 LOC106560694 coding downstream 530687 49749113 ~ 49767125 (+)
LOC110491010 LOC106560692 coding downstream 849783 50068209 ~ 50093310 (+)
LOC110491026 LOC106560691 coding downstream 879961 50098387 ~ 50100624 (+)
LOC110491039 LOC106560690 coding downstream 932035 50150461 ~ 50159171 (+)
LOC110491040 LOC106560688 coding downstream 962874 50181300 ~ 50198685 (+)
G152939 NA non-coding upstream 130880 49085933 ~ 49086463 (+)
G152919 NA non-coding upstream 150684 49066372 ~ 49066659 (+)
G152916 NA non-coding upstream 152460 49064666 ~ 49064883 (+)
G152913 NA non-coding upstream 153591 49063516 ~ 49063752 (+)
G152911 NA non-coding upstream 155669 49061413 ~ 49061674 (+)
G153137 hmg20a non-coding downstream 236681 49455107 ~ 49459615 (+)
G153238 NA non-coding downstream 333083 49551509 ~ 49551842 (+)
G153260 NA non-coding downstream 362981 49581407 ~ 49581617 (+)
G153261 NA non-coding downstream 363496 49581922 ~ 49582239 (+)
G153274 NA non-coding downstream 382996 49601422 ~ 49601642 (+)
G152167 NA other upstream 659657 48556782 ~ 48557686 (+)
G150997 NA other upstream 1669764 47497948 ~ 47547579 (+)
uevld uevld other upstream 2232117 46981686 ~ 47007672 (+)
G148191 NA other upstream 3724964 45472082 ~ 45492379 (+)
G147510 NA other upstream 4345843 44870800 ~ 44871500 (+)
G154859 NA other downstream 1946989 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 2103370 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 2193840 51412121 ~ 51417154 (+)
G155541 NA other downstream 2202421 51420847 ~ 51421122 (+)

Expression


Co-expression Network