G153274


Basic Information

Item Value
gene id G153274
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 49601422 ~ 49601642 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU175414
ccggtaccgagacaATGTGCAGGAGTACAGGTTGGTCAAggcaatttgtacatgtaggtagcagagaaaacagtctatgacttgggtgactggagtctctaacaatttttggggctttcctcctggattgcaggaagcttggccccagtgatgtactgggccgtacgcactaccctctgtagcaccttacggtcagatgctgagcagttgccataccaggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU175414 True 221 lncRNA 0.39 1 49601422 49601642

Neighbor

gene id symbol gene type direction distance location
cdkn1cb LOC106560698 coding upstream 862871 48736519 ~ 48738551 (+)
prr5l prr5l coding upstream 1099542 48481528 ~ 48501880 (+)
fcsk fuk coding upstream 1153635 48394983 ~ 48447787 (+)
LOC118940424 NA coding upstream 1184364 48412707 ~ 48417058 (+)
osbpl5 LOC106560704 coding upstream 1467448 48027409 ~ 48133974 (+)
LOC110490948 LOC106560694 coding downstream 147471 49749113 ~ 49767125 (+)
LOC110491010 LOC106560692 coding downstream 466567 50068209 ~ 50093310 (+)
LOC110491026 LOC106560691 coding downstream 496745 50098387 ~ 50100624 (+)
LOC110491039 LOC106560690 coding downstream 548819 50150461 ~ 50159171 (+)
LOC110491040 LOC106560688 coding downstream 579658 50181300 ~ 50198685 (+)
G153261 NA non-coding upstream 19183 49581922 ~ 49582239 (+)
G153260 NA non-coding upstream 19805 49581407 ~ 49581617 (+)
G153238 NA non-coding upstream 49580 49551509 ~ 49551842 (+)
G153137 hmg20a non-coding upstream 141807 49455107 ~ 49459615 (+)
G153015 peak1 non-coding upstream 382996 49217343 ~ 49218426 (+)
G153275 NA non-coding downstream 481 49602123 ~ 49602332 (+)
G153373 NA non-coding downstream 140529 49742171 ~ 49768855 (+)
G153391 NA non-coding downstream 173654 49775296 ~ 49775541 (+)
G153393 NA non-coding downstream 175829 49777471 ~ 49777700 (+)
G153394 NA non-coding downstream 177749 49779391 ~ 49779599 (+)
G152167 NA other upstream 1043736 48556782 ~ 48557686 (+)
G150997 NA other upstream 2053843 47497948 ~ 47547579 (+)
uevld uevld other upstream 2616196 46981686 ~ 47007672 (+)
G148191 NA other upstream 4109043 45472082 ~ 45492379 (+)
G147510 NA other upstream 4729922 44870800 ~ 44871500 (+)
G154859 NA other downstream 1563773 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 1720154 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 1810624 51412121 ~ 51417154 (+)
G155541 NA other downstream 1819205 51420847 ~ 51421122 (+)

Expression


Co-expression Network